Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
180
DNase-seq
65
ChIP-seq
1
Hi-C
Assay category
180
DNA accessibility
65
DNA binding
1
3D chromatin structure
Target of assay
32
transcription factor
19
histone
19
histone modification
12
control
11
narrow histone mark
8
broad histone mark
6
RNA binding protein
2
chromatin remodeller
Date released
649
February, 2021
411
August, 2017
400
November, 2017
399
May, 2021
341
May, 2020
313
August, 2021
267
October, 2019
211
June, 2019
200
May, 2022
170
February, 2023
168
July, 2018
96
July, 2019
94
December, 2017
88
November, 2018
April, 2019
76
October, 2018
September, 2018
70
May, 2019
61
November, 2019
60
March, 2020
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
23
October, 2017
22
February, 2020
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
245
bam
233
bed narrowPeak
233
bigBed narrowPeak
233
bigWig
180
bed bed3+
180
bed broadPeak
180
bigBed broadPeak
35
fastq
Organism
246
Homo sapiens
Biosample type
167
tissue
51
primary cell
28
cell line
Organ
81
kidney
43
musculature of body
35
heart
32
limb
30
brain
27
blood
27
bodily fluid
20
epithelium
18
connective tissue
18
ureter
7
eye
7
spleen
vasculature
5
blood vessel
4
pancreas
3
liver
2
artery
1
adipose tissue
Project
246
AMP
Genome assembly (visualization)
233
GRCh38
211
hg19
Lab
246
AMP-T2D consortium
Audit category:
25
inconsistent ontology term
1
inconsistent control
month_released!
April, 2019
September, 2018
organ_slims!
vasculature
BIOSAMPLE
ASSAY
246 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
ChIP-seq
Hi-C
tissue
heart
18
muscle of arm
17
kidney
13
muscle of leg
13
brain
12
+ See 33 more…
primary cell
cardiac fibroblast
3
5
skeletal muscle satellite cell
8
mesenchymal stem cell
7
cardiac muscle cell
1
3
epithelial cell of proximal tubule
1
3
+ See 13 more…
cell line
GM12878
27
HepG2
1
See all biosamples
Download