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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
34
ChIP-seq
4
MeRIP-seq
4
total RNA-seq
1
ATAC-seq
1
DNase-seq
1
Hi-C
Assay category
34
DNA binding
4
Transcription
2
DNA accessibility
1
3D chromatin structure
Target of assay
28
transcription factor
6
control
2
RNA binding protein
2
chromatin remodeller
2
nucleotide modification
Date released
683
February, 2021
400
November, 2017
382
August, 2017
373
May, 2021
341
May, 2020
313
August, 2021
279
October, 2019
198
June, 2019
153
February, 2023
135
July, 2018
120
May, 2022
115
May, 2019
95
July, 2019
88
November, 2018
80
April, 2019
75
December, 2017
74
October, 2018
58
March, 2020
47
September, 2023
45
November, 2019
40
May, 2024
40
September, 2020
39
February, 2018
35
December, 2018
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
April, 2018
16
January, 2021
15
May, 2023
12
September, 2018
10
November, 2020
8
January, 2018
6
September, 2017
5
March, 2019
5
March, 2023
4
December, 2019
2
June, 2018
1
August, 2018
1
August, 2022
1
October, 2022
Available data
40
bam
35
bigWig
35
fastq
32
bed narrowPeak
31
bigBed narrowPeak
4
tsv
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
Organism
45
Homo sapiens
Biosample type
28
cell line
11
tissue
6
primary cell
Organ
27
blood
27
bodily fluid
10
pancreas
7
spleen
6
connective tissue
epithelium
1
liver
Project
45
AMP
Genome assembly (visualization)
36
GRCh38
36
hg19
Lab
41
AMP-T2D consortium
4
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
1
inconsistent control
month_released!
January, 2019
organ_slims!
epithelium
BIOSAMPLE
ASSAY
45 results
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Clear Filters
ChIP-seq
MeRIP-seq
total RNA-seq
ATAC-seq
DNase-seq
Hi-C
cell line
GM12878
27
HepG2
1
tissue
spleen
7
islet of Langerhans
4
primary cell
osteoblast
4
1
1
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