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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
35
total RNA-seq
19
ChIP-seq
3
single cell RNA-seq
2
RNA microarray
Assay category
38
Transcription
19
DNA binding
Target of assay
14
transcription factor
7
histone
7
histone modification
RNA binding protein
6
chromatin remodeller
4
broad histone mark
4
control
3
narrow histone mark
Date released
715
February, 2021
403
August, 2017
394
May, 2021
369
November, 2017
341
May, 2020
318
August, 2021
314
October, 2019
214
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
115
May, 2019
108
July, 2019
90
December, 2017
76
April, 2019
73
September, 2018
67
November, 2018
65
October, 2018
64
March, 2020
60
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
May, 2024
33
December, 2018
25
February, 2020
24
January, 2019
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
39
tsv
29
bam
25
bigWig
24
fastq
15
bed narrowPeak
15
bigBed narrowPeak
Organism
59
Homo sapiens
Biosample type
35
tissue
17
cell line
5
primary cell
2
in vitro differentiated cells
Organ
12
blood
12
bodily fluid
12
brain
11
liver
7
spleen
6
epithelium
3
blood vessel
3
heart
3
kidney
3
limb
3
vasculature
2
adipose tissue
2
artery
2
connective tissue
2
musculature of body
1
eye
1
nerve
1
pancreas
1
spinal cord
Project
59
AMP
Genome assembly (visualization)
25
GRCh38
25
hg19
Lab
59
AMP-T2D consortium
Audit category:
4
audit script error
3
inconsistent ontology term
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
59 results
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Clear Filters
total RNA-seq
ChIP-seq
single cell RNA-seq
RNA microarray
tissue
spleen
7
Ammon's horn
1
C1 segment of cervical spinal cord
1
amygdala
1
anterior cingulate cortex
1
+ See 24 more…
cell line
GM12878
12
HepG2
5
primary cell
hepatocyte
5
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
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