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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
MeRIP-seq
9
total RNA-seq
3
single cell RNA-seq
2
RNA microarray
1
ATAC-seq
1
DNase-seq
Assay category
12
Transcription
2
DNA accessibility
Target of assay
5
control
5
nucleotide modification
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
80
April, 2019
76
October, 2018
73
November, 2018
73
September, 2018
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
25
February, 2020
23
October, 2017
19
April, 2020
16
November, 2020
15
May, 2023
12
January, 2019
11
September, 2017
10
December, 2019
8
December, 2018
8
January, 2021
7
August, 2020
7
January, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
13
tsv
11
bam
10
bigWig
2
bed narrowPeak
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
bigBed narrowPeak
Organism
26
Homo sapiens
Biosample type
11
primary cell
7
tissue
6
cell line
2
in vitro differentiated cells
Organ
12
epithelium
10
pancreas
6
connective tissue
5
liver
3
kidney
Project
26
AMP
Genome assembly (visualization)
11
GRCh38
11
hg19
Lab
16
AMP-T2D consortium
10
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
8
inconsistent ontology term
4
audit script error
month_released!
March, 2020
organ_slims!
bodily fluid
BIOSAMPLE
ASSAY
26 results
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Clear Filters
MeRIP-seq
total RNA-seq
single cell RNA-seq
RNA microarray
ATAC-seq
DNase-seq
primary cell
osteoblast
4
1
1
hepatocyte
5
tissue
islet of Langerhans
4
kidney
1
kidney interstitium
1
renal glomerulus
1
cell line
EndoC_BH1
6
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
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