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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
58
ChIP-seq
Assay category
58
DNA binding
Target of assay
244
transcription factor
104
histone
104
histone modification
79
control
66
recombinant protein
58
broad histone mark
46
narrow histone mark
37
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
109
August, 2017
76
May, 2021
58
May, 2019
55
October, 2019
50
November, 2017
37
April, 2019
20
May, 2024
October, 2018
17
September, 2018
15
December, 2017
10
October, 2017
9
August, 2021
8
February, 2018
8
June, 2019
6
November, 2019
4
January, 2019
0
May, 2022
Available data
54
bam
53
bed narrowPeak
53
bigWig
45
bigBed narrowPeak
41
tagAlign
16
fastq
10
bed broadPeak
8
bigBed broadPeak
Organism
58
Homo sapiens
Biosample type
42
tissue
8
cell line
8
in vitro differentiated cells
Organ
42
brain
8
liver
3
embryo
Project
58
AMP
Genome assembly (visualization)
53
GRCh38
18
hg19
Lab
58
AMP-T2D consortium
Audit category:
7
inconsistent control read length
month_released!
October, 2018
BIOSAMPLE
ASSAY
58 results
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ChIP-seq
tissue
layer of hippocampus
12
caudate nucleus
8
substantia nigra
8
cingulate gyrus
7
middle frontal area 46
7
cell line
HepG2
8
in vitro differentiated cells
pancreatic endoderm
3
definitive endodermal cell
1
embryonic stem cell
1
endocrine cell
1
posterior foregut
1
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