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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
total RNA-seq
11
ChIP-seq
8
ATAC-seq
Assay category
15
Transcription
11
DNA binding
8
DNA accessibility
Target of assay
histone
28
histone modification
18
broad histone mark
11
control
10
narrow histone mark
Date released
715
February, 2021
318
November, 2017
314
May, 2020
299
August, 2021
May, 2021
213
August, 2017
205
February, 2023
200
May, 2022
199
June, 2019
168
July, 2018
118
October, 2019
108
July, 2019
88
November, 2018
63
December, 2017
61
March, 2020
59
September, 2020
51
November, 2019
49
April, 2018
47
September, 2023
46
October, 2018
41
September, 2018
December, 2018
28
May, 2019
25
February, 2020
23
February, 2018
23
January, 2019
20
April, 2019
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
October, 2017
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
5
May, 2024
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
33
fastq
32
bam
23
bigWig
15
tsv
6
bed narrowPeak
2
tagAlign
1
bed broadPeak
Organism
34
Homo sapiens
Biosample type
23
in vitro differentiated cells
11
tissue
Organ
7
embryo
5
pancreas
4
brain
1
adipose tissue
1
connective tissue
1
spleen
Project
34
AMP
Genome assembly (visualization)
23
GRCh38
22
hg19
Lab
33
AMP-T2D consortium
1
Stephen Parker, UMich
month_released!
December, 2018
May, 2021
target.investigated_as!
histone
BIOSAMPLE
ASSAY
34 results
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Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
in vitro differentiated cells
pancreatic endoderm
4
3
definitive endodermal cell
2
1
embryonic stem cell
2
1
endocrine cell
2
1
posterior foregut
2
1
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tissue
body of pancreas
4
brain
3
cerebellum (Hemisphere)
1
islet of Langerhans
1
omental fat pad
1
+ See 1 more…
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