Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
snATAC-seq
6
total RNA-seq
4
ATAC-seq
3
ChIP-seq
1
Hi-C
1
pCHi-C
Assay category
12
DNA accessibility
6
Transcription
3
DNA binding
1
3D chromatin structure
Target of assay
3
histone
3
histone modification
3
narrow histone mark
Date released
188
August, 2017
157
July, 2018
104
May, 2022
72
September, 2018
61
May, 2021
56
February, 2023
55
November, 2019
53
October, 2018
39
April, 2018
32
February, 2021
19
September, 2020
18
October, 2019
14
March, 2020
11
September, 2017
10
November, 2020
8
January, 2021
7
August, 2020
7
November, 2018
6
July, 2019
5
March, 2019
5
October, 2017
August, 2021
4
June, 2019
3
August, 2018
3
October, 2022
2
May, 2019
1
August, 2022
1
February, 2020
1
June, 2018
Available data
10
bigWig
7
tsv
6
bam
3
bed narrowPeak
1
bedpe bed3+
1
hic
Organism
23
Homo sapiens
Biosample type
18
tissue
5
cell line
Organ
23
pancreas
14
brain
10
heart
8
blood
8
bodily fluid
7
blood vessel
7
musculature of body
7
vasculature
6
epithelium
4
connective tissue
4
liver
3
adipose tissue
3
limb
2
artery
2
intestine
2
kidney
1
adrenal gland
1
esophagus
1
eye
1
gonad
1
large intestine
1
lung
1
mammary gland
1
nerve
1
ovary
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
thymus
1
urinary bladder
1
vein
Project
15
T1D
8
AMP
Genome assembly (visualization)
11
hg19
6
GRCh38
Lab
15
AMP-T2D consortium
8
Kyle Gaulton, UCSD
Audit category:
5
inconsistent ontology term
month_released!
August, 2021
BIOSAMPLE
ASSAY
23 results
search-icon
table-tab-icon
Clear Filters
snATAC-seq
total RNA-seq
ATAC-seq
ChIP-seq
Hi-C
pCHi-C
tissue
islet of Langerhans
4
2
2
2
pancreas
4
1
1
1
body of pancreas
1
cell line
EndoC_BH1
2
2
1
Download