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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
total RNA-seq
4
ATAC-seq
3
ChIP-seq
2
Hi-C
2
pCHi-C
Assay category
8
Transcription
4
DNA accessibility
3
DNA binding
2
3D chromatin structure
Target of assay
3
histone
3
histone modification
3
narrow histone mark
Date released
315
November, 2017
242
August, 2017
194
May, 2020
157
July, 2018
144
May, 2022
72
September, 2018
63
December, 2017
61
May, 2021
60
November, 2018
56
February, 2023
55
November, 2019
53
October, 2018
39
April, 2018
39
August, 2021
35
February, 2021
25
October, 2019
19
September, 2020
17
March, 2020
16
July, 2019
11
September, 2017
10
November, 2020
8
January, 2021
7
August, 2020
6
June, 2019
5
December, 2019
5
January, 2019
5
March, 2019
5
October, 2017
3
August, 2018
3
October, 2022
2
February, 2020
2
May, 2019
1
August, 2022
1
December, 2018
1
June, 2018
Available data
11
bigWig
10
tsv
7
bam
3
bed narrowPeak
2
bedpe bed3+
2
hic
Organism
19
Homo sapiens
Biosample type
14
tissue
5
cell line
Organ
15
pancreas
14
brain
10
heart
7
blood vessel
7
musculature of body
7
vasculature
6
epithelium
4
connective tissue
4
liver
3
adipose tissue
3
limb
2
artery
2
intestine
2
kidney
1
adrenal gland
1
esophagus
1
eye
1
gonad
1
large intestine
1
lung
1
mammary gland
1
nerve
1
ovary
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
thymus
1
urinary bladder
1
vein
Project
12
AMP
7
T1D
Genome assembly (visualization)
13
hg19
7
GRCh38
Lab
19
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
month_released!
January, 2018
BIOSAMPLE
ASSAY
19 results
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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
Hi-C
pCHi-C
tissue
islet of Langerhans
2
2
2
liver
1
1
1
pancreas
1
1
1
body of pancreas
1
right lobe of liver
1
cell line
EndoC_BH1
2
2
1
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