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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
57
ATAC-seq
41
WGBS
10
MeRIP-seq
7
total RNA-seq
Assay category
57
DNA accessibility
41
DNA methylation
7
Transcription
Target of assay
5
control
5
nucleotide modification
Date released
181
August, 2017
157
July, 2018
104
May, 2022
72
September, 2018
61
May, 2021
55
February, 2023
55
November, 2019
53
October, 2018
39
April, 2018
32
February, 2021
19
September, 2020
18
October, 2019
14
March, 2020
11
September, 2017
10
November, 2020
8
January, 2021
7
August, 2020
7
November, 2018
6
July, 2019
5
March, 2019
5
October, 2017
4
August, 2021
4
June, 2019
3
August, 2018
3
October, 2022
2
May, 2019
1
August, 2022
1
February, 2020
1
June, 2018
Available data
80
zippedFastqFolder
24
bam
24
fastq
18
bed narrowPeak
6
txt
1
tsv
Organism
115
Homo sapiens
Biosample type
80
primary cell
29
tissue
6
cell line
Organ
115
pancreas
86
epithelium
41
liver
12
brain
8
connective tissue
4
musculature of body
3
blood vessel
3
heart
3
limb
3
vasculature
2
adipose tissue
2
artery
1
eye
1
nerve
1
spinal cord
Project
80
HPAP
35
AMP
Genome assembly (visualization)
18
hg19
Lab
80
Klaus Kaestner, Upenn
24
Kyle Gaulton, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
1
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
BIOSAMPLE
ASSAY
115 results
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Clear Filters
ATAC-seq
WGBS
MeRIP-seq
total RNA-seq
primary cell
pancreatic alpha cell
22
25
pancreatic beta cell
13
16
pancreatic acinar cell
4
tissue
islet of Langerhans
18
4
6
body of pancreas
1
cell line
EndoC_BH1
6
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