Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
45
ChIP-seq
27
total RNA-seq
17
ATAC-seq
1
DNase-seq
1
Hi-C
Assay category
45
DNA binding
27
Transcription
18
DNA accessibility
1
3D chromatin structure
Target of assay
39
histone
39
histone modification
21
broad histone mark
18
narrow histone mark
6
control
Date released
188
August, 2017
157
July, 2018
104
May, 2022
72
September, 2018
61
May, 2021
56
February, 2023
55
November, 2019
53
October, 2018
39
April, 2018
32
February, 2021
19
September, 2020
18
October, 2019
14
March, 2020
11
September, 2017
10
November, 2020
8
January, 2021
7
August, 2020
7
November, 2018
6
July, 2019
5
March, 2019
5
October, 2017
4
August, 2021
4
June, 2019
3
August, 2018
3
October, 2022
2
May, 2019
1
August, 2022
1
February, 2020
1
June, 2018
Available data
86
bam
80
bigWig
72
fastq
53
bed narrowPeak
27
tsv
21
bigBed narrowPeak
2
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
hdf5
Organism
91
Homo sapiens
Biosample type
72
primary cell
15
cell line
4
tissue
Organ
98
brain
96
epithelium
91
pancreas
72
limb
50
blood vessel
50
vasculature
43
nerve
30
kidney
28
artery
22
eye
21
vein
11
heart
8
liver
6
connective tissue
4
gonad
4
ovary
3
adipose tissue
2
musculature of body
2
pituitary gland
1
lymph node
1
skin of body
1
spinal cord
Project
91
AMP
Genome assembly (visualization)
80
GRCh38
80
hg19
Lab
91
AMP-T2D consortium
Audit category:
32
missing controlled_by
Audit category:
1
inconsistent assembly
month_released!
April, 2020
BIOSAMPLE
ASSAY
91 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
DNase-seq
Hi-C
primary cell
pancreatic ductal cell
13
4
4
pancreatic beta cell
10
4
pancreatic acinar cell
8
2
3
pancreatic alpha cell
10
3
pancreatic endocrine cell
11
cell line
Panc1
13
1
1
tissue
islet of Langerhans
3
body of pancreas
1
Download