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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
78
total RNA-seq
58
ChIP-seq
8
ATAC-seq
6
WGBS
Assay category
78
Transcription
58
DNA binding
8
DNA accessibility
6
DNA methylation
Target of assay
37
histone
37
histone modification
22
broad histone mark
15
narrow histone mark
14
control
7
transcription factor
3
RNA binding protein
Date released
188
August, 2017
157
July, 2018
104
May, 2022
98
February, 2021
91
February, 2023
72
September, 2018
65
October, 2019
61
May, 2021
55
November, 2019
53
October, 2018
52
May, 2019
39
April, 2018
19
September, 2020
18
July, 2019
18
March, 2020
11
June, 2019
11
September, 2017
10
August, 2021
10
November, 2020
8
January, 2021
7
August, 2020
7
November, 2018
6
November, 2017
5
March, 2019
October, 2017
4
February, 2020
3
August, 2018
3
October, 2022
1
August, 2022
1
June, 2018
Available data
144
bam
122
bigWig
84
tsv
52
bed narrowPeak
40
bigBed narrowPeak
6
fastq
6
tagAlign
Organism
150
Homo sapiens
Biosample type
92
cell line
52
tissue
6
primary cell
Organ
455
connective tissue
386
adipose tissue
150
bone element
116
blood vessel
116
vasculature
87
heart
71
artery
37
epithelium
34
pancreas
28
brain
13
kidney
13
limb
8
skeleton
7
musculature of body
3
liver
Project
144
AMP
6
HPAP
Genome assembly (visualization)
130
GRCh38
130
hg19
Lab
144
AMP-T2D consortium
6
Klaus Kaestner, Upenn
Audit category:
26
inconsistent ontology term
month_released!
October, 2017
BIOSAMPLE
ASSAY
150 results
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Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
WGBS
cell line
smooth muscle cell of the coronary artery
52
6
8
EndoC_BH1
26
tissue
ascending aorta
16
thoracic aorta
16
aorta
13
coronary artery
5
body of pancreas
2
primary cell
pancreatic alpha cell
6
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