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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
52
total RNA-seq
15
ChIP-seq
9
ATAC-seq
2
DNase-seq
Assay category
52
Transcription
15
DNA binding
11
DNA accessibility
Target of assay
18
histone
18
histone modification
broad histone mark
7
control
4
narrow histone mark
4
transcription factor
Date released
66
February, 2021
35
February, 2023
12
October, 2019
5
May, 2019
3
July, 2019
2
August, 2021
2
February, 2020
2
June, 2019
Available data
78
bam
63
bigWig
52
tsv
19
bed narrowPeak
6
bigBed narrowPeak
6
tagAlign
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
78
Homo sapiens
Biosample type
66
cell line
12
tissue
Organ
459
connective tissue
387
adipose tissue
150
bone element
90
blood vessel
90
vasculature
83
brain
78
artery
71
heart
55
epithelium
46
pancreas
45
limb
35
kidney
26
nerve
21
eye
12
vein
8
skeleton
7
liver
4
gonad
4
ovary
2
pituitary gland
1
lymph node
1
skin of body
Project
78
AMP
Genome assembly (visualization)
71
GRCh38
71
hg19
Lab
78
AMP-T2D consortium
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
78 results
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total RNA-seq
ChIP-seq
ATAC-seq
DNase-seq
cell line
smooth muscle cell of the coronary artery
52
6
8
tissue
tibial artery
9
1
2
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