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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
104
total RNA-seq
27
ChIP-seq
22
ATAC-seq
6
WGBS
Assay category
104
Transcription
27
DNA binding
22
DNA accessibility
6
DNA methylation
Target of assay
21
histone
21
histone modification
11
narrow histone mark
10
broad histone mark
4
transcription factor
2
control
Date released
98
August, 2021
98
February, 2021
88
February, 2023
80
May, 2022
61
September, 2018
57
April, 2019
55
June, 2019
43
October, 2019
40
May, 2024
37
July, 2019
33
April, 2018
33
July, 2018
29
August, 2017
29
May, 2021
26
May, 2019
19
December, 2017
19
September, 2020
16
November, 2019
13
March, 2020
7
August, 2020
6
December, 2019
6
November, 2017
6
November, 2020
5
September, 2017
3
August, 2018
3
February, 2020
3
October, 2022
2
October, 2018
1
June, 2018
Available data
153
bam
143
bigWig
110
tsv
67
fastq
47
bed narrowPeak
14
bigBed narrowPeak
6
tagAlign
Organism
159
Homo sapiens
Biosample type
92
cell line
67
primary cell
Organ
455
connective tissue
386
adipose tissue
150
bone element
104
pancreas
93
epithelium
66
artery
66
blood vessel
66
heart
66
vasculature
8
kidney
8
skeleton
6
limb
3
liver
Project
153
AMP
6
HPAP
Genome assembly (visualization)
151
GRCh38
151
hg19
Lab
153
AMP-T2D consortium
6
Klaus Kaestner, Upenn
Audit category:
26
inconsistent ontology term
Audit category:
21
missing controlled_by
month_released!
February, 2018
BIOSAMPLE
ASSAY
159 results
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Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
WGBS
cell line
smooth muscle cell of the coronary artery
52
6
8
EndoC_BH1
26
primary cell
pancreatic ductal cell
4
13
4
pancreatic alpha cell
10
3
6
pancreatic beta cell
10
4
pancreatic acinar cell
2
8
3
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