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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
136
total RNA-seq
84
RNA microarray
16
ATAC-seq
6
ChIP-seq
6
WGBS
Assay category
136
Transcription
16
DNA accessibility
6
DNA binding
6
DNA methylation
Target of assay
4
transcription factor
2
control
Date released
248
February, 2021
95
February, 2023
80
May, 2022
61
October, 2019
61
September, 2018
33
April, 2018
33
July, 2018
29
August, 2017
27
May, 2021
20
June, 2019
19
September, 2020
17
December, 2017
15
July, 2019
15
November, 2019
8
August, 2021
8
May, 2019
7
August, 2020
6
December, 2019
6
March, 2020
6
November, 2020
5
September, 2017
4
November, 2017
3
August, 2018
3
October, 2022
2
February, 2020
2
October, 2018
1
June, 2018
Available data
158
bam
142
tsv
140
bigWig
84
txt
20
bed narrowPeak
6
fastq
6
tagAlign
Organism
248
Homo sapiens
Biosample type
150
tissue
92
cell line
6
primary cell
Organ
455
connective tissue
386
adipose tissue
150
bone element
66
artery
66
blood vessel
66
heart
66
vasculature
32
epithelium
32
pancreas
8
kidney
8
skeleton
6
limb
3
liver
Project
242
AMP
6
HPAP
Genome assembly (visualization)
156
GRCh38
156
hg19
Lab
242
AMP-T2D consortium
6
Klaus Kaestner, Upenn
Audit category:
110
inconsistent ontology term
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
248 results
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Clear Filters
total RNA-seq
RNA microarray
ATAC-seq
ChIP-seq
WGBS
tissue
bone element
84
bone tissue
58
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
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cell line
smooth muscle cell of the coronary artery
52
8
6
EndoC_BH1
26
primary cell
pancreatic alpha cell
6
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