Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 11candidate regulatory elements
  • 8accessible chromatin
  • 7binding sites
  • 6histone modifications
  • 4gene expression
Date released
  • 42September, 2022
  • 36February, 2021
  • 5June, 2020
  • 2January, 2021
  • 1May, 2020
  • 1May, 2022
  • 1November, 2021
  • 1October, 2022
Available data
  • 32bed bed3+
  • 8bigWig
  • 4tsv
Organism
  • 36Homo sapiens
Collection Tags
  • 13ChIP-Atlas
  • 12DGA
  • 11ENCODE
Biosample type
  • 17cell line
  • 13tissue
  • 6primary cell
Organ
  • 196epithelium
  • 188kidney
  • 110brain
  • 109connective tissue
  • 92musculature of body
  • 74bodily fluid
  • 71intestine
  • 70blood
  • 70lung
  • 68skin of body
  • 58limb
  • 53embryo
  • 49vasculature
  • 48heart
  • 46large intestine
  • 36blood vessel
  • 36bone element
  • 33extraembryonic component
  • 31pancreas
  • 29prostate gland
  • 29stomach
  • 28mammary gland
  • 28penis
  • 27lymph node
  • 26liver
  • 23adipose tissue
  • 18placenta
  • 18small intestine
  • 18ureter
  • 17eye
  • 15artery
  • 14adrenal gland
  • 12gonad
  • 11thymus
  • 10esophagus
  • 10spleen
  • 10uterus
  • 9skeleton
  • 9spinal cord
  • 8testis
  • 7vein
  • 5bone marrow
  • 5bronchus
  • 5lymphatic vessel
  • 5lymphoid tissue
  • 4mouth
  • 4ovary
  • 4thyroid gland
  • 4trachea
  • 3breast
  • 3nerve
  • 2tongue
  • 2vagina
  • 1pituitary gland
  • 1urinary bladder
Project
  • 36AMP
Genome assembly (visualization)
  • 32hg19
  • 8GRCh38
BIOSAMPLE
TYPE

36 results

search-icontable-tab-icon
Clear Filters
candidate regulatory elements
accessible chromatin
binding sites
histone modifications
gene expression
cell line
MG63111
OCI-LY1111
OCI-LY311
SJSA111
U2OS11
tissue
bone tissue4
distal epiphysis1
distal epiphysis of femur1
distal epiphysis of humerus1
distal epiphysis of tibia1
primary cell
mononuclear cell of bone marrow21
bone cell1
bone marrow cell1
stromal cell of bone marrow1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego