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Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
544
total RNA-seq
84
RNA microarray
18
single cell RNA-seq
3
snDrop-seq
Assay category
562
Transcription
Date released
649
February, 2021
186
August, 2021
182
May, 2021
168
July, 2018
145
May, 2020
96
August, 2017
95
February, 2023
60
May, 2022
56
September, 2020
49
April, 2018
49
July, 2019
47
September, 2023
27
September, 2018
26
October, 2019
25
February, 2020
20
November, 2019
15
February, 2018
15
March, 2020
14
November, 2020
10
April, 2020
10
December, 2019
4
March, 2023
4
May, 2023
3
August, 2018
3
June, 2018
2
October, 2018
1
November, 2018
1
October, 2022
Available data
552
tsv
544
bam
544
bigWig
89
txt
12
fastq
6
csv
Organism
649
Homo sapiens
Biosample type
537
tissue
78
cell line
22
in vitro differentiated cells
12
primary cell
Organ
448
connective tissue
386
adipose tissue
142
bone element
52
artery
52
blood vessel
52
heart
52
vasculature
26
epithelium
26
pancreas
8
kidney
1
liver
Project
637
AMP
12
HPAP
Genome assembly (visualization)
544
GRCh38
544
hg19
Lab
637
AMP-T2D consortium
12
Klaus Kaestner, Upenn
Audit category:
128
inconsistent ontology term
5
audit script error
replicates.library.nucleic_acid_term_name!
DNA
BIOSAMPLE
ASSAY
649 results
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total RNA-seq
RNA microarray
single cell RNA-seq
snDrop-seq
tissue
adipose tissue
381
bone element
84
bone tissue
58
kidney
5
visceral abdominal adipose tissue
3
+ See 5 more…
cell line
smooth muscle cell of the coronary artery
52
EndoC_BH1
26
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)
18
adipocyte
4
primary cell
Langerhans cell
12
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