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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
snATAC-seq
22
ATAC-seq
8
ChIP-seq
6
WGBS
2
pCHi-C
1
total RNA-seq
Assay category
49
DNA accessibility
8
DNA binding
6
DNA methylation
1
Transcription
Target of assay
5
transcription factor
3
control
Date released
406
November, 2017
315
August, 2017
288
October, 2019
218
June, 2019
217
May, 2021
196
May, 2020
140
May, 2022
133
August, 2021
120
May, 2019
110
February, 2023
94
December, 2017
87
November, 2018
80
April, 2019
74
October, 2018
66
February, 2021
59
July, 2019
49
March, 2020
46
September, 2018
41
November, 2019
40
May, 2024
35
December, 2018
30
January, 2019
24
February, 2018
23
October, 2017
16
January, 2021
11
May, 2023
11
September, 2017
9
April, 2020
8
January, 2018
7
August, 2020
5
March, 2019
3
October, 2022
3
September, 2020
2
November, 2020
1
August, 2018
1
August, 2022
1
March, 2023
Available data
33
fastq
28
bam
23
bed narrowPeak
8
tagAlign
7
bigWig
7
tsv
4
bed bedgraph
2
bed bed3
2
bed bed3+
Organism
66
Homo sapiens
Biosample type
36
primary cell
18
cell line
8
tissue
4
in vitro differentiated cells
Organ
14
artery
14
blood vessel
14
heart
14
vasculature
8
bone element
8
skeleton
7
connective tissue
6
epithelium
6
limb
6
pancreas
2
liver
Project
33
AMP
33
HPAP
Genome assembly (visualization)
30
hg19
24
GRCh38
Lab
33
AMP-T2D consortium
33
Klaus Kaestner, Upenn
Audit category:
27
audit script error
1
inconsistent replicate
BIOSAMPLE
ASSAY
66 results
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snATAC-seq
ATAC-seq
ChIP-seq
WGBS
pCHi-C
total RNA-seq
primary cell
Langerhans cell
27
pancreatic alpha cell
6
osteoblast
1
1
1
cell line
smooth muscle cell of the coronary artery
8
6
HepG2
1
1
iPSC derived cell line
2
tissue
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
proximal epiphysis
1
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in vitro differentiated cells
adipocyte
4
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