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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
527
total RNA-seq
84
RNA microarray
27
snATAC-seq
18
single cell RNA-seq
17
ATAC-seq
6
ChIP-seq
3
snDrop-seq
1
pCHi-C
Assay category
545
Transcription
44
DNA accessibility
6
DNA binding
Target of assay
3
control
3
transcription factor
Date released
683
February, 2021
388
August, 2017
385
May, 2021
301
August, 2021
285
May, 2020
240
October, 2019
200
May, 2022
199
February, 2023
186
June, 2019
167
July, 2018
111
November, 2017
106
May, 2019
84
July, 2019
79
April, 2019
73
September, 2018
69
October, 2018
59
September, 2020
49
April, 2018
48
March, 2020
47
September, 2023
40
May, 2024
39
February, 2018
38
November, 2019
35
December, 2017
26
November, 2018
25
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
13
January, 2021
11
September, 2017
10
November, 2020
9
January, 2019
8
January, 2018
7
August, 2020
7
December, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
December, 2019
3
June, 2018
1
August, 2022
1
July, 2025
Available data
551
bam
535
tsv
531
bigWig
89
txt
39
fastq
20
bed narrowPeak
6
csv
6
tagAlign
1
bed bed3
1
bed bed3+
Organism
683
Homo sapiens
Biosample type
545
tissue
92
cell line
42
primary cell
4
in vitro differentiated cells
Organ
451
connective tissue
386
adipose tissue
150
bone element
64
artery
64
blood vessel
64
heart
64
vasculature
26
epithelium
26
pancreas
8
kidney
8
skeleton
6
limb
1
liver
Project
644
AMP
39
HPAP
Genome assembly (visualization)
548
hg19
547
GRCh38
Lab
644
AMP-T2D consortium
39
Klaus Kaestner, Upenn
Audit category:
110
inconsistent ontology term
32
audit script error
replication_type!
isogenic
BIOSAMPLE
ASSAY
683 results
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Clear Filters
total RNA-seq
RNA microarray
snATAC-seq
single cell RNA-seq
ATAC-seq
ChIP-seq
snDrop-seq
pCHi-C
tissue
adipose tissue
381
bone element
84
bone tissue
58
kidney
5
visceral abdominal adipose tissue
3
+ See 13 more…
cell line
smooth muscle cell of the coronary artery
52
8
4
EndoC_BH1
26
iPSC derived cell line
2
primary cell
Langerhans cell
27
12
osteoblast
1
1
1
in vitro differentiated cells
adipocyte
4
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