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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
total RNA-seq
6
WGBS
5
ATAC-seq
2
ChIP-seq
1
pCHi-C
Assay category
18
Transcription
6
DNA methylation
5
DNA accessibility
2
DNA binding
Target of assay
2
transcription factor
Date released
295
November, 2017
74
October, 2019
62
November, 2018
59
December, 2017
56
May, 2020
32
February, 2021
32
June, 2019
28
December, 2018
24
July, 2019
23
August, 2017
23
November, 2019
21
January, 2019
18
August, 2021
16
March, 2020
14
May, 2019
14
May, 2021
7
December, 2019
7
October, 2018
6
February, 2023
6
November, 2020
3
January, 2021
1
April, 2019
1
July, 2018
Available data
24
tsv
21
bam
20
bigWig
6
fastq
4
bed bedgraph
3
bed narrowPeak
2
tagAlign
1
bed bed3
1
bed bed3+
Organism
32
Homo sapiens
Biosample type
22
in vitro differentiated cells
6
primary cell
4
cell line
Organ
6
epithelium
6
pancreas
4
connective tissue
2
artery
2
blood vessel
2
heart
2
liver
2
vasculature
Project
26
AMP
6
HPAP
Genome assembly (visualization)
26
hg19
21
GRCh38
Lab
26
AMP-T2D consortium
6
Klaus Kaestner, Upenn
Audit category:
18
inconsistent ontology term
1
inconsistent replicate
BIOSAMPLE
ASSAY
32 results
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total RNA-seq
WGBS
ATAC-seq
ChIP-seq
pCHi-C
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)
18
adipocyte
4
primary cell
pancreatic alpha cell
6
cell line
HepG2
1
1
smooth muscle cell of the coronary artery
2
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