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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
521
total RNA-seq
84
RNA microarray
27
snATAC-seq
17
single cell RNA-seq
16
ATAC-seq
6
ChIP-seq
1
snDrop-seq
Assay category
538
Transcription
43
DNA accessibility
6
DNA binding
Target of assay
3
control
3
transcription factor
Date released
672
February, 2021
355
August, 2017
253
August, 2021
251
May, 2021
198
May, 2022
197
May, 2020
190
October, 2019
156
June, 2019
152
February, 2023
123
July, 2018
111
November, 2017
106
May, 2019
78
April, 2019
72
September, 2018
68
October, 2018
59
September, 2020
48
July, 2019
47
September, 2023
40
May, 2024
38
February, 2018
37
November, 2019
32
December, 2017
24
November, 2018
19
April, 2020
16
March, 2020
16
October, 2017
15
May, 2023
11
January, 2021
10
April, 2018
9
January, 2019
9
September, 2017
8
January, 2018
7
August, 2020
7
December, 2018
6
November, 2020
4
March, 2023
3
December, 2019
2
June, 2018
1
August, 2018
1
August, 2022
1
October, 2022
Available data
543
bam
527
tsv
524
bigWig
89
txt
39
fastq
19
bed narrowPeak
6
tagAlign
5
csv
Organism
672
Homo sapiens
Biosample type
537
tissue
92
cell line
39
primary cell
4
in vitro differentiated cells
Organ
443
connective tissue
381
adipose tissue
150
bone element
64
artery
64
blood vessel
64
heart
64
vasculature
26
epithelium
26
pancreas
8
skeleton
6
kidney
6
limb
Project
633
AMP
39
HPAP
Genome assembly (visualization)
540
GRCh38
540
hg19
Lab
633
AMP-T2D consortium
39
Klaus Kaestner, Upenn
Audit category:
110
inconsistent ontology term
32
audit script error
BIOSAMPLE
ASSAY
672 results
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Clear Filters
total RNA-seq
RNA microarray
snATAC-seq
single cell RNA-seq
ATAC-seq
ChIP-seq
snDrop-seq
tissue
adipose tissue
381
bone element
84
bone tissue
58
kidney
5
distal epiphysis
1
+ See 8 more…
cell line
smooth muscle cell of the coronary artery
52
8
4
EndoC_BH1
26
iPSC derived cell line
2
primary cell
Langerhans cell
27
12
in vitro differentiated cells
adipocyte
4
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