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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
46
ATAC-seq
42
total RNA-seq
2
snATAC-seq
1
CRISPR genome editing followed by sgRNA sequencing
Assay category
48
DNA accessibility
42
Transcription
Date released
188
August, 2017
157
July, 2018
104
May, 2022
98
February, 2021
91
February, 2023
72
September, 2018
61
May, 2021
55
November, 2019
53
October, 2018
44
October, 2019
39
April, 2018
19
September, 2020
14
March, 2020
11
September, 2017
10
November, 2020
9
July, 2019
8
January, 2021
7
August, 2020
7
May, 2019
7
November, 2018
6
August, 2021
6
June, 2019
5
March, 2019
5
October, 2017
3
August, 2018
3
February, 2020
3
October, 2022
1
August, 2022
1
June, 2018
Available data
37
fastq
35
bed narrowPeak
Organism
90
Homo sapiens
Biosample type
53
tissue
37
primary cell
1
cell line
Organ
56
pancreas
52
epithelium
36
heart
35
artery
35
blood vessel
35
vasculature
31
eye
14
connective tissue
8
bone element
8
skeleton
1
adipose tissue
1
brain
Project
37
HPAP
36
AMP
18
T1D
Genome assembly (visualization)
35
GRCh38
Lab
37
Klaus Kaestner, Upenn
36
AMP-T2D consortium
18
Kyle Gaulton, UCSD
month_released!
April, 2019
organ_slims!
pericardium
BIOSAMPLE
ASSAY
91 results
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Clear Filters
ATAC-seq
total RNA-seq
snATAC-seq
CRISPR genome editing followed by sgRNA sequencing
tissue
coronary artery
35
islet of Langerhans
11
5
2
primary cell
pancreatic alpha cell
27
pancreatic beta cell
10
cell line
EndoC_BH1
1
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