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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 35ATAC-seq
  • 12total RNA-seq
  • 3CRISPR genome editing followed by DNA sequencing
  • 2snATAC-seq
  • 1single cell RNA-seq
Assay category
  • 37DNA accessibility
  • 13Transcription
Date released
  • 295November, 2017
  • 148May, 2021
  • 144May, 2020
  • 124October, 2019
  • 66August, 2021
  • 64November, 2018
  • 62December, 2017
  • 62June, 2019
  • 60July, 2019
  • 56August, 2017
  • 53February, 2023
  • 48March, 2020
  • 45July, 2018
  • 43February, 2021
  • 39April, 2018
  • 28December, 2018
  • 25February, 2020
  • 24November, 2019
  • 21January, 2019
  • 14May, 2019
  • 10November, 2020
  • 8October, 2018
  • 7December, 2019
  • 7October, 2017
  • 5January, 2021
  • 5March, 2019
  • 3August, 2018
  • 3October, 2022
  • 2April, 2019
  • 2May, 2022
  • 2September, 2017
  • 1February, 2018
  • 1June, 2018
  • 1March, 2023
  • 1September, 2018
Available data
  • 12tsv
  • 7txt
  • 5bed bed3
  • 3bed bed3+
  • 3bed bedgraph
  • 3bed narrowPeak
  • 3bigWig
Organism
  • 53Homo sapiens
Biosample type
  • 29tissue
  • 12primary cell
  • 9in vitro differentiated cells
  • 3cell line
Organ
  • 18pancreas
  • 8bone element
  • 8skeleton
  • 7connective tissue
  • 1adipose tissue
  • 1brain
  • 1heart
Project
  • 32AMP
  • 21T1D
Genome assembly (visualization)
  • 12hg19
Lab
  • 29AMP-T2D consortium
  • 21Kyle Gaulton, UCSD
  • 3Struan F.A. Grant, CHOP
Audit category:
  • 9inconsistent ontology term
replication_type!
  • unreplicated
BIOSAMPLE
ASSAY

53 results

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Clear Filters
ATAC-seq
total RNA-seq
CRISPR genome editing followed by DNA sequencing
snATAC-seq
single cell RNA-seq
tissue
islet of Langerhans1152
acetabular part of hip bone11
ilium11
ischium11
pubis11
primary cell
gabaergic neuron3
glutamatergic neuron3
microglial cell/astrocyte3
oligodendrocyte3
in vitro differentiated cells
adipocyte11
immature adipocyte11
preadipocyte11
Progenitor cell of Hypothalamus (neural progenitor cell)1
embryonic stem cell1
cell line
EndoC_BH13
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