Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
527
accessible chromatin
257
target gene predictions
73
gene expression
56
variant allelic effects
7
eQTL
6
binding sites
5
chromatin state
5
differential activity
2
candidate regulatory elements
Date released
2410
February, 2021
2262
September, 2022
374
May, 2021
349
February, 2024
333
November, 2021
283
September, 2023
256
June, 2020
136
May, 2020
126
August, 2021
90
March, 2020
88
January, 2022
76
October, 2022
70
March, 2023
60
January, 2020
56
January, 2021
49
May, 2022
46
February, 2020
44
November, 2022
32
February, 2023
28
March, 2024
27
August, 2017
19
April, 2020
14
October, 2019
13
November, 2019
9
August, 2018
8
April, 2019
5
May, 2019
3
November, 2020
3
September, 2018
2
January, 2018
2
May, 2024
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
853
bed bed3+
260
bigWig
66
tsv
24
csv
11
bigBed narrowPeak
Organism
938
Homo sapiens
Biosample type
536
primary cell
272
cell line
78
tissue
52
in vitro differentiated cells
Organ
228
epithelium
88
connective tissue
63
embryo
55
uterus
47
pancreas
blood
40
bodily fluid
39
liver
35
intestine
32
musculature of body
29
vasculature
22
blood vessel
brain
20
heart
19
kidney
19
skin of body
16
large intestine
16
lung
14
stomach
12
adrenal gland
11
eye
11
mammary gland
9
extraembryonic component
8
esophagus
8
lymph node
6
bone element
6
gonad
6
limb
6
prostate gland
5
small intestine
4
bronchus
4
lymphatic vessel
4
placenta
4
thyroid gland
3
adipose tissue
3
artery
3
lymphoid tissue
3
ovary
3
penis
2
spinal cord
2
testis
2
thymus
1
bone marrow
1
breast
1
mouth
1
nerve
1
nose
1
spleen
1
tongue
1
trachea
1
ureter
1
urinary bladder
1
vein
Project
604
AMP
333
ENCODE
1
T1D
Genome assembly (visualization)
867
hg19
521
GRCh38
organ_slims!
blood
brain
BIOSAMPLE
TYPE
938 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
target gene predictions
gene expression
variant allelic effects
eQTL
binding sites
chromatin state
differential activity
candidate regulatory elements
primary cell
fibroblast
14
4
6
endothelial cell
11
6
1
2
1
pericyte cell
9
9
smooth muscle cell
7
6
1
2
1
endothelial cell of hepatic sinusoid
6
4
6
+ See 183 more…
cell line
HeLa-S3
51
H1-hESC
1
37
HFFc6
19
H9
6
lymphocyte
6
+ See 138 more…
tissue
left cardiac atrium
5
stomach
3
heart
2
islet of Langerhans
1
1
large intestine
1
1
+ See 60 more…
in vitro differentiated cells
extended pluripotent stem (EPS) cells
9
progenitor cell of endocrine pancreas
9
hepatocyte(AFP)
3
pancreatic ductal cell
3
B cell
2
+ See 23 more…
See all biosamples
Download