Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
172
target gene predictions
74
gene expression
63
accessible chromatin
56
variant allelic effects
34
chromatin state
7
eQTL
6
binding sites
5
differential activity
1
caQTL
1
candidate regulatory elements
Date released
2496
February, 2021
2305
September, 2022
380
May, 2021
370
February, 2024
317
November, 2021
286
September, 2023
277
June, 2020
144
May, 2020
120
August, 2021
112
March, 2020
101
January, 2022
100
October, 2022
77
January, 2020
70
March, 2023
56
January, 2021
53
February, 2020
49
May, 2022
44
November, 2022
39
May, 2024
32
August, 2017
29
February, 2023
28
March, 2024
19
April, 2020
12
October, 2019
11
November, 2019
9
August, 2018
8
May, 2019
3
November, 2020
3
September, 2018
2
April, 2019
2
January, 2018
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
300
bed bed3+
67
tsv
45
bigWig
34
bed bed9+
24
csv
11
bigBed narrowPeak
Organism
419
Homo sapiens
Biosample type
192
primary cell
173
cell line
32
in vitro differentiated cells
22
tissue
Organ
78
epithelium
51
embryo
51
uterus
31
liver
28
blood
28
bodily fluid
25
pancreas
21
connective tissue
18
musculature of body
17
vasculature
15
blood vessel
6
intestine
heart
large intestine
2
adipose tissue
2
esophagus
2
stomach
1
adrenal gland
1
bone element
1
bone marrow
1
brain
1
bronchus
1
eye
1
kidney
1
lung
1
lymphoid tissue
1
mammary gland
1
prostate gland
1
skin of body
1
thyroid gland
Project
418
AMP
1
T1D
Genome assembly (visualization)
348
hg19
215
GRCh38
organ_slims!
heart
large intestine
BIOSAMPLE
TYPE
419 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
gene expression
accessible chromatin
variant allelic effects
chromatin state
eQTL
binding sites
differential activity
caQTL
candidate regulatory elements
primary cell
endothelial cell of hepatic sinusoid
4
4
6
hepatocyte
5
5
1
fibroblast
2
6
endothelial cell
1
3
2
1
mature neutrophil
7
+ See 70 more…
cell line
HeLa-S3
51
H1-hESC
37
HFFc6
19
K562
16
GM12878
6
+ See 25 more…
in vitro differentiated cells
extended pluripotent stem (EPS) cells
9
progenitor cell of endocrine pancreas
9
hepatocyte(AFP)
3
pancreatic ductal cell
3
adipose-derived stem cell
2
+ See 5 more…
tissue
liver
1
1
1
pancreatic ductal cell
2
pancreatic stellate cell
2
Schwann cell
1
aorta wall
1
+ See 13 more…
See all biosamples
Download