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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
151
total RNA-seq
57
ChIP-seq
49
single cell RNA-seq
14
ATAC-seq
Assay category
200
Transcription
57
DNA binding
14
DNA accessibility
Target of assay
39
histone
39
histone modification
21
broad histone mark
18
narrow histone mark
14
transcription factor
6
RNA binding protein
6
chromatin remodeller
4
control
Date released
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
266
bam
262
bigWig
195
tsv
153
fastq
67
bed narrowPeak
35
bigBed narrowPeak
1
csv
Organism
271
Homo sapiens
Biosample type
127
tissue
121
primary cell
23
cell line
Organ
229
pancreas
94
epithelium
18
blood
18
bodily fluid
7
spleen
5
liver
2
connective tissue
Project
271
AMP
Genome assembly (visualization)
262
GRCh38
262
hg19
Lab
271
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
Audit category:
32
missing controlled_by
month_released!
February, 2021
BIOSAMPLE
ASSAY
271 results
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Clear Filters
total RNA-seq
ChIP-seq
single cell RNA-seq
ATAC-seq
tissue
islet of Langerhans
120
spleen
7
primary cell
pancreatic ductal cell
4
13
3
4
pancreatic beta cell
10
9
4
pancreatic alpha cell
10
7
3
pancreatic acinar cell
2
8
5
3
pancreatic endocrine cell
11
+ See 11 more…
cell line
GM12878
18
HepG2
5
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