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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
183
DNase-seq
53
ChIP-seq
5
total RNA-seq
Assay category
183
DNA accessibility
53
DNA binding
5
Transcription
Target of assay
25
histone
25
histone modification
17
transcription factor
13
narrow histone mark
12
broad histone mark
11
control
9
RNA binding protein
6
chromatin remodeller
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
May, 2020
319
August, 2021
293
October, 2019
211
June, 2019
200
May, 2022
174
February, 2023
168
July, 2018
120
May, 2019
107
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
24
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
241
bam
230
bigWig
225
bed narrowPeak
225
bigBed narrowPeak
183
bed bed3+
183
bed broadPeak
183
bigBed broadPeak
30
fastq
5
tsv
Organism
241
Homo sapiens
Biosample type
167
tissue
51
primary cell
23
cell line
Organ
81
kidney
43
musculature of body
35
heart
32
limb
30
brain
20
epithelium
18
blood
18
bodily fluid
18
connective tissue
18
ureter
eye
7
liver
7
spleen
7
vasculature
5
blood vessel
4
pancreas
2
artery
1
adipose tissue
Project
241
AMP
Genome assembly (visualization)
230
GRCh38
207
hg19
Lab
241
AMP-T2D consortium
Audit category:
26
inconsistent ontology term
month_released!
May, 2020
organ_slims!
eye
BIOSAMPLE
ASSAY
241 results
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Clear Filters
DNase-seq
ChIP-seq
total RNA-seq
tissue
heart
18
muscle of arm
17
kidney
13
muscle of leg
13
brain
12
+ See 34 more…
primary cell
cardiac fibroblast
3
5
skeletal muscle satellite cell
8
mesenchymal stem cell
7
cardiac muscle cell
1
3
epithelial cell of proximal tubule
1
3
+ See 16 more…
cell line
GM12878
18
HepG2
5
See all biosamples
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