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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
425
ChIP-seq
5
total RNA-seq
Assay category
425
DNA binding
5
Transcription
Target of assay
256
transcription factor
93
histone
93
histone modification
73
control
66
recombinant protein
54
broad histone mark
41
RNA binding protein
39
narrow histone mark
21
chromatin remodeller
2
other context
2
other post-translational modification
Date released
641
February, 2021
411
August, 2017
400
November, 2017
399
May, 2021
341
May, 2020
216
October, 2019
200
May, 2022
183
August, 2021
168
July, 2018
139
February, 2023
124
June, 2019
94
December, 2017
88
November, 2018
84
July, 2019
76
October, 2018
73
September, 2018
65
May, 2019
61
November, 2019
59
September, 2020
58
March, 2020
57
April, 2019
49
April, 2018
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
23
October, 2017
21
February, 2020
19
April, 2020
16
January, 2021
16
November, 2020
11
September, 2017
8
January, 2018
7
August, 2020
7
December, 2019
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
1
May, 2023
Available data
416
bam
354
bigWig
348
fastq
330
bed narrowPeak
329
bigBed narrowPeak
78
tagAlign
66
bed broadPeak
60
bigBed broadPeak
5
tsv
3
tar
Organism
430
Homo sapiens
Biosample type
338
cell line
89
tissue
3
primary cell
Organ
320
liver
91
brain
18
blood
18
bodily fluid
7
spleen
6
epithelium
vasculature
3
blood vessel
Project
430
AMP
Genome assembly (visualization)
302
GRCh38
301
hg19
Lab
430
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
organ_slims!
eye
kidney
ureter
vasculature
BIOSAMPLE
ASSAY
430 results
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Clear Filters
ChIP-seq
total RNA-seq
cell line
HepG2
315
5
GM12878
18
tissue
layer of hippocampus
22
caudate nucleus
15
substantia nigra
15
cingulate gyrus
14
middle frontal area 46
14
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primary cell
astrocyte of the cerebellum
3
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