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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
40
ChIP-seq
7
ATAC-seq
5
total RNA-seq
Assay category
40
DNA binding
7
DNA accessibility
5
Transcription
Target of assay
19
histone
19
histone modification
14
broad histone mark
14
transcription factor
7
control
6
RNA binding protein
6
chromatin remodeller
5
narrow histone mark
Date released
406
November, 2017
397
May, 2021
341
May, 2020
314
August, 2021
310
October, 2019
286
August, 2017
260
February, 2021
200
June, 2019
200
May, 2022
191
February, 2023
166
July, 2018
120
May, 2019
94
December, 2017
90
July, 2019
87
November, 2018
April, 2019
73
September, 2018
62
March, 2020
60
November, 2019
59
September, 2020
53
October, 2018
47
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
December, 2018
30
January, 2019
23
February, 2020
22
October, 2017
19
April, 2020
16
January, 2021
14
May, 2023
11
September, 2017
10
December, 2019
10
November, 2020
7
August, 2020
7
January, 2018
5
March, 2019
5
March, 2023
4
October, 2022
3
August, 2018
3
June, 2018
1
August, 2022
Available data
46
fastq
44
bam
39
bigWig
32
bed narrowPeak
27
bigBed narrowPeak
14
tagAlign
5
tsv
4
bed broadPeak
Organism
52
Homo sapiens
Biosample type
29
tissue
23
cell line
Organ
18
blood
18
bodily fluid
16
brain
8
spleen
5
liver
5
pancreas
1
adipose tissue
connective tissue
Project
52
AMP
Genome assembly (visualization)
39
GRCh38
38
hg19
Lab
51
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
4
missing controlled_by
month_released!
April, 2019
December, 2018
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
52 results
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Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
tissue
brain
15
spleen
7
1
body of pancreas
4
cerebellum (Hemisphere)
1
islet of Langerhans
1
cell line
GM12878
18
HepG2
5
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