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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
152
ChIP-seq
146
total RNA-seq
49
single cell RNA-seq
14
ATAC-seq
Assay category
195
Transcription
152
DNA binding
14
DNA accessibility
Target of assay
124
histone
124
histone modification
75
broad histone mark
49
narrow histone mark
23
control
5
RNA binding protein
5
transcription factor
Date released
715
February, 2021
411
August, 2017
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
356
bam
333
bigWig
190
tsv
143
bed narrowPeak
123
fastq
111
bigBed narrowPeak
1
csv
Organism
361
Homo sapiens
Biosample type
235
tissue
126
primary cell
Organ
231
pancreas
99
epithelium
50
blood vessel
50
vasculature
28
brain
21
heart
7
limb
7
musculature of body
5
artery
5
kidney
2
connective tissue
Project
361
AMP
Genome assembly (visualization)
333
hg19
332
GRCh38
Lab
361
AMP-T2D consortium
Audit category:
9
inconsistent ontology term
Audit category:
32
missing controlled_by
month_released!
November, 2017
BIOSAMPLE
ASSAY
361 results
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Clear Filters
ChIP-seq
total RNA-seq
single cell RNA-seq
ATAC-seq
tissue
islet of Langerhans
120
ascending aorta
16
thoracic aorta
16
temporal lobe
15
angular gyrus
13
+ See 7 more…
primary cell
pancreatic ductal cell
13
4
3
4
pancreatic beta cell
10
9
4
pancreatic alpha cell
10
7
3
pancreatic acinar cell
8
2
5
3
pancreatic endocrine cell
11
+ See 12 more…
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