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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
35
total RNA-seq
15
RRBS
15
small RNA-seq
12
WGBS
8
Hi-C
6
ATAC-seq
2
FAIRE-seq
Assay category
50
Transcription
27
DNA methylation
8
3D chromatin structure
8
DNA accessibility
Target of assay
control
Date released
390
May, 2021
335
November, 2017
326
February, 2021
318
May, 2020
310
August, 2017
306
August, 2021
274
October, 2019
209
June, 2019
204
February, 2023
200
May, 2022
168
July, 2018
97
May, 2019
93
July, 2019
81
November, 2018
73
December, 2017
73
September, 2018
66
April, 2019
63
March, 2020
59
September, 2020
58
November, 2019
49
April, 2018
47
September, 2023
October, 2018
40
May, 2024
31
December, 2018
31
February, 2018
26
January, 2019
23
February, 2020
19
April, 2020
19
October, 2017
16
January, 2021
14
May, 2023
11
November, 2020
10
December, 2019
7
August, 2020
January, 2018
5
March, 2019
5
March, 2023
5
September, 2017
4
October, 2022
3
August, 2018
3
June, 2018
1
August, 2022
Available data
70
bigWig
67
bam
50
tsv
23
bed bedMethyl
23
bigBed bedMethyl
7
bed narrowPeak
4
bed bed3+
4
hdf5
2
bigBed narrowPeak
Organism
93
Homo sapiens
Biosample type
67
tissue
26
primary cell
Organ
25
heart
18
connective tissue
15
brain
13
epithelium
adipose tissue
12
vasculature
11
blood vessel
11
kidney
10
liver
10
musculature of body
6
pancreas
5
limb
3
artery
2
pericardium
1
eye
Project
93
AMP
Genome assembly (visualization)
76
hg19
64
GRCh38
Lab
93
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
month_released!
January, 2018
October, 2018
organ_slims!
adipose tissue
target.investigated_as!
control
BIOSAMPLE
ASSAY
93 results
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Clear Filters
total RNA-seq
RRBS
small RNA-seq
WGBS
Hi-C
ATAC-seq
FAIRE-seq
tissue
heart left ventricle
2
1
4
2
right lobe of liver
2
2
1
body of pancreas
2
2
gastrocnemius medialis
4
heart
2
1
1
+ See 24 more…
primary cell
epithelial cell of proximal tubule
1
1
kidney epithelial cell
1
1
renal cortical epithelial cell
1
1
skeletal muscle satellite cell
1
1
astrocyte of the cerebellum
1
+ See 17 more…
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