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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
ChIP-seq
5
total RNA-seq
2
ATAC-seq
2
Hi-C
2
WGBS
Assay category
15
DNA binding
5
Transcription
2
3D chromatin structure
2
DNA accessibility
2
DNA methylation
Target of assay
12
transcription factor
3
control
2
RNA binding protein
2
chromatin remodeller
Date released
216
February, 2021
50
May, 2019
47
October, 2019
43
February, 2023
27
December, 2018
18
January, 2019
15
November, 2018
11
July, 2019
8
January, 2021
6
August, 2021
5
June, 2019
4
March, 2020
3
February, 2020
3
November, 2017
1
January, 2018
1
May, 2021
Available data
24
bam
22
bigWig
15
fastq
14
bed narrowPeak
12
bigBed narrowPeak
5
tsv
2
bed bed3+
2
hdf5
1
bed bedMethyl
1
bigBed bedMethyl
Organism
26
Homo sapiens
Biosample type
15
cell line
7
tissue
4
primary cell
Organ
63
liver
25
heart
20
brain
19
connective tissue
15
blood
15
bodily fluid
13
adipose tissue
13
epithelium
13
pancreas
12
vasculature
11
blood vessel
11
kidney
10
musculature of body
9
spleen
5
limb
3
artery
2
pericardium
1
eye
0
bone element
Project
26
AMP
Genome assembly (visualization)
21
hg19
20
GRCh38
Lab
26
AMP-T2D consortium
BIOSAMPLE
ASSAY
26 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
Hi-C
WGBS
cell line
GM12878
15
tissue
thoracic aorta
2
1
aorta
2
ascending aorta
1
coronary artery
1
primary cell
brain microvascular endothelial cell
1
endothelial cell of coronary artery
1
endothelial cell of hepatic sinusoid
1
smooth muscle cell of the coronary artery
1
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