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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 35total RNA-seq
  • 15RRBS
  • 15small RNA-seq
  • 12WGBS
  • 8Hi-C
  • 6ATAC-seq
  • 3single cell RNA-seq
  • 2FAIRE-seq
Assay category
  • 53Transcription
  • 27DNA methylation
  • 83D chromatin structure
  • 8DNA accessibility
Target of assay
  • 3control
Date released
  • 406November, 2017
  • 399May, 2021
  • 354August, 2017
  • 341May, 2020
  • 329February, 2021
  • 318August, 2021
  • 313October, 2019
  • 217June, 2019
  • 204February, 2023
  • 200May, 2022
  • 168July, 2018
  • 120May, 2019
  • 96July, 2019
  • 94December, 2017
  • 87November, 2018
  • 80April, 2019
  • 73September, 2018
  • 63March, 2020
  • 60November, 2019
  • 59September, 2020
  • 53October, 2018
  • 49April, 2018
  • 47September, 2023
  • 40May, 2024
  • 39February, 2018
  • 35December, 2018
  • 30January, 2019
  • 23February, 2020
  • 22October, 2017
  • 19April, 2020
  • 16January, 2021
  • 16November, 2020
  • 14May, 2023
  • 11September, 2017
  • 10December, 2019
  • 7August, 2020
  • 7January, 2018
  • 5March, 2019
  • 5March, 2023
  • 4October, 2022
  • 3August, 2018
  • 3June, 2018
  • 1August, 2022
  • 1July, 2025
Available data
  • 73bigWig
  • 70bam
  • 53tsv
  • 23bed bedMethyl
  • 23bigBed bedMethyl
  • 7bed narrowPeak
  • 4bed bed3+
  • 4hdf5
  • 2bigBed narrowPeak
Organism
  • 96Homo sapiens
Biosample type
  • 67tissue
  • 29primary cell
Organ
  • 25heart
  • 18brain
  • 18connective tissue
  • 13epithelium
  • adipose tissue
  • 12vasculature
  • 11blood vessel
  • 11kidney
  • 10liver
  • 10musculature of body
  • 6pancreas
  • 5limb
  • 3artery
  • 2pericardium
  • 1eye
Project
  • 96AMP
Genome assembly (visualization)
  • 79hg19
  • 67GRCh38
Lab
  • 96AMP-T2D consortium
Audit category:
  • 2inconsistent ontology term
organ_slims!
  • adipose tissue
BIOSAMPLE
ASSAY

96 results

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Clear Filters
total RNA-seq
RRBS
small RNA-seq
WGBS
Hi-C
ATAC-seq
single cell RNA-seq
FAIRE-seq
tissue
heart left ventricle2142
right lobe of liver221
body of pancreas22
gastrocnemius medialis4
heart211
primary cell
cerebellar granule cell2
epithelial cell of proximal tubule11
kidney epithelial cell11
renal cortical epithelial cell11
skeletal muscle satellite cell11
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