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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 39total RNA-seq
  • 18small RNA-seq
  • 15RRBS
  • 10WGBS
  • 6Hi-C
  • 4ATAC-seq
  • 3single cell RNA-seq
  • 2FAIRE-seq
Assay category
  • 60Transcription
  • 25DNA methylation
  • 63D chromatin structure
  • 6DNA accessibility
Target of assay
  • 3control
Date released
  • 649February, 2021
  • 411August, 2017
  • 403November, 2017
  • 399May, 2021
  • 341May, 2020
  • 313August, 2021
  • 267October, 2019
  • 213June, 2019
  • 200May, 2022
  • 170February, 2023
  • 168July, 2018
  • 97July, 2019
  • 94December, 2017
  • 88November, 2018
  • 80April, 2019
  • 76October, 2018
  • 73September, 2018
  • 70May, 2019
  • 61November, 2019
  • 60March, 2020
  • 59September, 2020
  • 49April, 2018
  • 47September, 2023
  • 40May, 2024
  • 39February, 2018
  • 35December, 2018
  • 30January, 2019
  • 23October, 2017
  • 22February, 2020
  • 19April, 2020
  • 16January, 2021
  • 16November, 2020
  • 15May, 2023
  • 11September, 2017
  • 10December, 2019
  • 8January, 2018
  • 7August, 2020
  • 5March, 2019
  • 5March, 2023
  • 4August, 2018
  • 4October, 2022
  • 3June, 2018
  • 1August, 2022
  • 1July, 2025
Available data
  • 75bigWig
  • 73bam
  • 60tsv
  • 22bed bedMethyl
  • 22bigBed bedMethyl
  • 5bed narrowPeak
  • 2bed bed3+
  • 2bigBed narrowPeak
  • 2hdf5
Organism
  • 97Homo sapiens
Biosample type
  • 70tissue
  • 27primary cell
Organ
  • 25heart
  • 18brain
  • 18connective tissue
  • 13epithelium
  • 12adipose tissue
  • 12vasculature
  • blood vessel
  • 11kidney
  • 10liver
  • 10musculature of body
  • 6pancreas
  • 5limb
  • 3artery
  • 2pericardium
  • 1eye
Project
  • 97AMP
Genome assembly (visualization)
  • 82hg19
  • 71GRCh38
Lab
  • 97AMP-T2D consortium
Audit category:
  • 2inconsistent ontology term
organ_slims!
  • blood vessel
BIOSAMPLE
ASSAY

97 results

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Clear Filters
total RNA-seq
small RNA-seq
RRBS
WGBS
Hi-C
ATAC-seq
single cell RNA-seq
FAIRE-seq
tissue
heart left ventricle2142
omental fat pad41
right lobe of liver221
subcutaneous adipose tissue41
body of pancreas22
primary cell
cerebellar granule cell2
epithelial cell of proximal tubule11
kidney epithelial cell11
mesenchymal stem cell of adipose11
renal cortical epithelial cell11
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