Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
38
total RNA-seq
17
small RNA-seq
12
WGBS
8
RRBS
6
ATAC-seq
6
Hi-C
1
FAIRE-seq
Assay category
55
Transcription
20
DNA methylation
7
DNA accessibility
6
3D chromatin structure
Target of assay
control
Date released
672
February, 2021
365
May, 2021
344
August, 2017
331
November, 2017
318
May, 2020
231
October, 2019
172
August, 2021
153
February, 2023
135
July, 2018
124
June, 2019
120
May, 2022
93
May, 2019
88
July, 2019
82
November, 2018
57
December, 2017
56
March, 2020
47
April, 2019
45
November, 2019
45
October, 2018
40
May, 2024
40
September, 2020
31
December, 2018
31
February, 2018
26
January, 2019
25
February, 2020
20
October, 2017
19
April, 2020
16
April, 2018
16
January, 2021
12
September, 2018
8
January, 2018
8
November, 2020
5
March, 2019
5
March, 2023
2
December, 2019
2
June, 2018
1
August, 2018
1
August, 2022
1
May, 2023
1
October, 2022
Available data
72
bigWig
71
bam
55
tsv
16
bed bedMethyl
16
bigBed bedMethyl
6
bed narrowPeak
2
bed bed3+
2
hdf5
1
bigBed narrowPeak
Organism
88
Homo sapiens
Biosample type
73
tissue
15
primary cell
Organ
25
heart
18
connective tissue
15
brain
epithelium
12
adipose tissue
12
vasculature
11
blood vessel
kidney
10
liver
10
musculature of body
6
pancreas
5
limb
3
artery
2
pericardium
1
eye
Project
88
AMP
Genome assembly (visualization)
71
hg19
69
GRCh38
Lab
88
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
epithelium
kidney
target.investigated_as!
control
BIOSAMPLE
ASSAY
88 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
small RNA-seq
WGBS
RRBS
ATAC-seq
Hi-C
FAIRE-seq
tissue
heart left ventricle
2
4
1
2
omental fat pad
4
1
right lobe of liver
2
2
1
subcutaneous adipose tissue
4
1
body of pancreas
2
2
+ See 24 more…
primary cell
mesenchymal stem cell of adipose
1
1
skeletal muscle satellite cell
1
1
astrocyte of the cerebellum
1
brain pericyte
1
cardiac atrium fibroblast
1
+ See 8 more…
See all biosamples
Download