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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 39total RNA-seq
  • 17small RNA-seq
  • 12WGBS
  • 11RRBS
  • 8Hi-C
  • 6ATAC-seq
  • 3single cell RNA-seq
  • 1FAIRE-seq
Assay category
  • 59Transcription
  • 23DNA methylation
  • 83D chromatin structure
  • 7DNA accessibility
Target of assay
  • 3control
Date released
  • 707February, 2021
  • 411August, 2017
  • 406November, 2017
  • 399May, 2021
  • 341May, 2020
  • 284October, 2019
  • 205February, 2023
  • 200May, 2022
  • 189August, 2021
  • 168July, 2018
  • 137June, 2019
  • 115May, 2019
  • 97July, 2019
  • 94December, 2017
  • 88November, 2018
  • 76October, 2018
  • 73September, 2018
  • 62March, 2020
  • 61November, 2019
  • 59September, 2020
  • 57April, 2019
  • 49April, 2018
  • 40May, 2024
  • 39February, 2018
  • 35December, 2018
  • 30January, 2019
  • 25February, 2020
  • 23October, 2017
  • 19April, 2020
  • 16January, 2021
  • 16November, 2020
  • 11September, 2017
  • 8January, 2018
  • 7August, 2020
  • 7December, 2019
  • 5March, 2019
  • 5March, 2023
  • 4August, 2018
  • 4October, 2022
  • 3June, 2018
  • 1August, 2022
  • 1July, 2025
  • 1May, 2023
Available data
  • 78bigWig
  • 75bam
  • 59tsv
  • 19bed bedMethyl
  • 19bigBed bedMethyl
  • 6bed narrowPeak
  • 4bed bed3+
  • 4hdf5
  • 1bigBed narrowPeak
Organism
  • 97Homo sapiens
Biosample type
  • 73tissue
  • 24primary cell
Organ
  • 25heart
  • 18brain
  • 18connective tissue
  • 13epithelium
  • 12adipose tissue
  • 12vasculature
  • 11blood vessel
  • kidney
  • 10liver
  • 10musculature of body
  • 6pancreas
  • 5limb
  • 3artery
  • 2pericardium
  • 1eye
Project
  • 97AMP
Genome assembly (visualization)
  • 80hg19
  • 73GRCh38
Lab
  • 97AMP-T2D consortium
Audit category:
  • 1inconsistent ontology term
organ_slims!
  • kidney
BIOSAMPLE
ASSAY

97 results

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Clear Filters
total RNA-seq
small RNA-seq
WGBS
RRBS
Hi-C
ATAC-seq
single cell RNA-seq
FAIRE-seq
tissue
heart left ventricle2412
omental fat pad41
right lobe of liver221
subcutaneous adipose tissue41
body of pancreas22
primary cell
cerebellar granule cell2
mesenchymal stem cell of adipose11
skeletal muscle satellite cell11
Purkinje cell1
astrocyte of the cerebellum1
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