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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 15RRBS
  • 13total RNA-seq
  • 12WGBS
  • 8Hi-C
  • 6ATAC-seq
  • 3single cell RNA-seq
  • 2FAIRE-seq
Assay category
  • 27DNA methylation
  • 16Transcription
  • 83D chromatin structure
  • 8DNA accessibility
Target of assay
  • 3control
Date released
  • 406November, 2017
  • 322August, 2017
  • 288October, 2019
  • 218June, 2019
  • 217May, 2021
  • 196May, 2020
  • 140May, 2022
  • 134August, 2021
  • 120May, 2019
  • 111February, 2023
  • 94December, 2017
  • 87November, 2018
  • 80April, 2019
  • 74October, 2018
  • 66February, 2021
  • 59July, 2019
  • 49March, 2020
  • 46September, 2018
  • 41November, 2019
  • 40May, 2024
  • 35December, 2018
  • 30January, 2019
  • 24February, 2018
  • 23October, 2017
  • 16January, 2021
  • 11May, 2023
  • 11September, 2017
  • 10April, 2020
  • 8January, 2018
  • 7August, 2020
  • 5March, 2019
  • 5March, 2023
  • 4October, 2022
  • 3September, 2020
  • 2November, 2020
  • 1August, 2018
  • 1August, 2022
Available data
  • 36bigWig
  • 33bam
  • 23bed bedMethyl
  • 23bigBed bedMethyl
  • 16tsv
  • 7bed narrowPeak
  • 4bed bed3+
  • 4hdf5
  • 2bigBed narrowPeak
Organism
  • 59Homo sapiens
Biosample type
  • 30tissue
  • 29primary cell
Organ
  • 18heart
  • 13epithelium
  • 10brain
  • 9kidney
  • 9vasculature
  • 8blood vessel
  • 7connective tissue
  • 7musculature of body
  • 5limb
  • 3artery
  • 3liver
  • 2pancreas
  • 2pericardium
  • 1adipose tissue
  • 1eye
Project
  • 59AMP
Genome assembly (visualization)
  • 42hg19
  • 30GRCh38
Lab
  • 59AMP-T2D consortium
Audit category:
  • 2inconsistent ontology term
replicates.library.nucleic_acid_term_name!
  • RNA
BIOSAMPLE
ASSAY

59 results

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Clear Filters
RRBS
total RNA-seq
WGBS
Hi-C
ATAC-seq
single cell RNA-seq
FAIRE-seq
tissue
heart left ventricle142
gastrocnemius medialis4
aorta2
heart right ventricle2
kidney11
primary cell
cerebellar granule cell2
epithelial cell of proximal tubule11
kidney epithelial cell11
renal cortical epithelial cell11
Purkinje cell1
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