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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 21total RNA-seq
  • 15RRBS
  • 12WGBS
  • 8Hi-C
  • 7small RNA-seq
  • 6ATAC-seq
  • 3single cell RNA-seq
Assay category
  • 31Transcription
  • 27DNA methylation
  • 83D chromatin structure
  • 6DNA accessibility
Target of assay
  • 3control
Date released
  • 704February, 2021
  • 406November, 2017
  • 378August, 2017
  • 271August, 2021
  • 265May, 2021
  • 264October, 2019
  • 253May, 2020
  • 198May, 2022
  • 188June, 2019
  • 158February, 2023
  • 124July, 2018
  • 120May, 2019
  • 91December, 2017
  • 86November, 2018
  • 79April, 2019
  • 75October, 2018
  • 72July, 2019
  • 72September, 2018
  • 60November, 2019
  • 59September, 2020
  • 47September, 2023
  • 40May, 2024
  • 38February, 2018
  • 35December, 2018
  • 32March, 2020
  • 30January, 2019
  • 19April, 2020
  • 16October, 2017
  • 15May, 2023
  • 14January, 2021
  • 12November, 2020
  • 10April, 2018
  • 10December, 2019
  • 9September, 2017
  • 8January, 2018
  • 7August, 2020
  • 4March, 2023
  • 2June, 2018
  • 1August, 2018
  • 1August, 2022
  • 1October, 2022
Available data
  • 49bigWig
  • 46bam
  • 31tsv
  • 23bed bedMethyl
  • 23bigBed bedMethyl
  • 5bed narrowPeak
  • 4bed bed3+
  • 4hdf5
Organism
  • 72Homo sapiens
Biosample type
  • 55tissue
  • 17primary cell
Organ
  • 19heart
  • 12connective tissue
  • 10adipose tissue
  • 10vasculature
  • 9blood vessel
  • 9brain
  • 8epithelium
  • 8liver
  • 6musculature of body
  • 6pancreas
  • 5limb
  • 4kidney
  • 1artery
  • 1eye
  • 1pericardium
Project
  • 72AMP
Genome assembly (visualization)
  • 55hg19
  • 45GRCh38
Lab
  • 72AMP-T2D consortium
Audit category:
  • 2inconsistent ontology term
replication_type!
  • anisogenic
BIOSAMPLE
ASSAY

72 results

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Clear Filters
total RNA-seq
RRBS
WGBS
Hi-C
small RNA-seq
ATAC-seq
single cell RNA-seq
tissue
heart left ventricle2142
omental fat pad41
right lobe of liver212
subcutaneous adipose tissue41
body of pancreas22
primary cell
cerebellar granule cell2
Purkinje cell1
astrocyte of the cerebellum1
brain microvascular endothelial cell1
brain pericyte1
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