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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 24total RNA-seq
  • 15RRBS
  • 11small RNA-seq
  • 4Hi-C
  • 3single cell RNA-seq
  • 2FAIRE-seq
  • 1WGBS
Assay category
  • 38Transcription
  • 16DNA methylation
  • 43D chromatin structure
  • 2DNA accessibility
Target of assay
  • 3control
Date released
  • 295November, 2017
  • 148May, 2021
  • 144May, 2020
  • 124October, 2019
  • 66August, 2021
  • 64November, 2018
  • 62December, 2017
  • 62June, 2019
  • 60July, 2019
  • 56August, 2017
  • 53February, 2023
  • 48March, 2020
  • 45July, 2018
  • 43February, 2021
  • 39April, 2018
  • 28December, 2018
  • 25February, 2020
  • 24November, 2019
  • 21January, 2019
  • 14May, 2019
  • 10November, 2020
  • 8October, 2018
  • 7December, 2019
  • 7October, 2017
  • 5January, 2021
  • 5March, 2019
  • 3August, 2018
  • 3October, 2022
  • 2April, 2019
  • 2May, 2022
  • 2September, 2017
  • 1February, 2018
  • 1June, 2018
  • 1March, 2023
  • 1September, 2018
Available data
  • 44bigWig
  • 40bam
  • 38tsv
  • 15bed bedMethyl
  • 15bigBed bedMethyl
  • 4bed bed3+
  • 4hdf5
  • 2bed narrowPeak
  • 2bigBed narrowPeak
Organism
  • 60Homo sapiens
Biosample type
  • 31primary cell
  • 29tissue
Organ
  • 17brain
  • 13epithelium
  • 11kidney
  • 8connective tissue
  • 8heart
  • 5liver
  • 5musculature of body
  • 5vasculature
  • 4blood vessel
  • 2adipose tissue
  • 2artery
  • 2pancreas
  • 2pericardium
  • 1eye
Project
  • 60AMP
Genome assembly (visualization)
  • 59hg19
  • 38GRCh38
Lab
  • 60AMP-T2D consortium
Audit category:
  • 2inconsistent ontology term
replication_type!
  • unreplicated
BIOSAMPLE
ASSAY

60 results

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Clear Filters
total RNA-seq
RRBS
small RNA-seq
Hi-C
single cell RNA-seq
FAIRE-seq
WGBS
primary cell
cerebellar granule cell2
epithelial cell of proximal tubule11
kidney epithelial cell11
mesenchymal stem cell of adipose11
renal cortical epithelial cell11
tissue
frontal cortex111
diencephalon11
heart11
kidney11
liver2
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