Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 15RRBS
  • 4Hi-C
  • 3single cell RNA-seq
  • 1WGBS
  • 1total RNA-seq
Assay category
  • 16DNA methylation
  • 43D chromatin structure
  • 4Transcription
Target of assay
  • 3control
Date released
  • 295November, 2017
  • 74October, 2019
  • 62November, 2018
  • 59December, 2017
  • 56May, 2020
  • 32February, 2021
  • 32June, 2019
  • 28December, 2018
  • 24July, 2019
  • 23August, 2017
  • 23November, 2019
  • 21January, 2019
  • 18August, 2021
  • 16March, 2020
  • 14May, 2019
  • 14May, 2021
  • 7December, 2019
  • 7October, 2018
  • 6February, 2023
  • 6November, 2020
  • 3January, 2021
  • 1April, 2019
  • 1July, 2018
Available data
  • 15bed bedMethyl
  • 15bigBed bedMethyl
  • 8bigWig
  • 4bam
  • 4bed bed3+
  • 4hdf5
  • 4tsv
Organism
  • 24Homo sapiens
Biosample type
  • 17primary cell
  • 7tissue
Organ
  • 8brain
  • 8epithelium
  • 4kidney
  • 3liver
  • 3vasculature
  • 2blood vessel
  • 2connective tissue
  • 2heart
  • 2pancreas
  • 1eye
  • 1musculature of body
  • 1pericardium
Project
  • 24AMP
Genome assembly (visualization)
  • 23hg19
  • 4GRCh38
Lab
  • 24AMP-T2D consortium
Audit category:
  • 2inconsistent ontology term
BIOSAMPLE
ASSAY

24 results

search-icontable-tab-icon
Clear Filters
RRBS
Hi-C
single cell RNA-seq
WGBS
total RNA-seq
primary cell
cerebellar granule cell2
Purkinje cell1
astrocyte of the cerebellum1
brain microvascular endothelial cell1
brain pericyte1
tissue
brain1
heart left ventricle1
islet of Langerhans1
kidney1
pancreas1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego