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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
ChIP-seq
8
ATAC-seq
3
single cell RNA-seq
Assay category
15
DNA binding
8
DNA accessibility
3
Transcription
Target of assay
12
histone
12
histone modification
10
broad histone mark
3
control
2
narrow histone mark
Date released
715
February, 2021
406
November, 2017
404
August, 2017
399
May, 2021
341
May, 2020
318
August, 2021
314
October, 2019
218
June, 2019
204
February, 2023
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
18
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
4
August, 2018
3
June, 2018
3
October, 2022
1
August, 2022
1
March, 2023
Available data
20
fastq
18
bam
17
bigWig
14
tagAlign
12
bed narrowPeak
6
bigBed narrowPeak
4
bed broadPeak
3
tsv
Organism
26
Homo sapiens
Biosample type
23
tissue
3
primary cell
Organ
16
brain
6
pancreas
1
adipose tissue
1
connective tissue
1
epithelium
1
spleen
Project
26
AMP
Genome assembly (visualization)
17
GRCh38
16
hg19
Lab
25
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
1
inconsistent ontology term
Audit category:
4
missing controlled_by
month_released!
May, 2022
BIOSAMPLE
ASSAY
26 results
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Clear Filters
ChIP-seq
ATAC-seq
single cell RNA-seq
tissue
brain
15
body of pancreas
4
cerebellum (Hemisphere)
1
islet of Langerhans
1
omental fat pad
1
+ See 1 more…
primary cell
pancreatic cell
1
pancreatic ductal cell
1
unclassified exocrine cell
1
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