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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
68
ChIP-seq
Assay category
68
DNA binding
Target of assay
68
transcription factor
25
RNA binding protein
19
histone
19
histone modification
16
recombinant protein
14
control
11
narrow histone mark
8
broad histone mark
7
chromatin remodeller
3
other context
3
other post-translational modification
Date released
244
November, 2017
64
November, 2018
47
August, 2017
42
December, 2017
28
December, 2018
16
May, 2021
15
October, 2018
January, 2019
11
August, 2021
7
October, 2019
6
April, 2019
5
February, 2021
5
May, 2019
5
May, 2024
4
June, 2019
1
November, 2019
Available data
68
bam
67
bed narrowPeak
67
bigBed narrowPeak
67
bigWig
64
fastq
Organism
68
Homo sapiens
Biosample type
57
cell line
7
tissue
4
primary cell
Organ
49
liver
12
blood
12
bodily fluid
3
spleen
2
epithelium
1
connective tissue
1
eye
1
heart
1
kidney
Project
68
AMP
Genome assembly (visualization)
67
GRCh38
65
hg19
Lab
68
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
3
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
month_released!
January, 2019
organ_slims!
bone marrow
BIOSAMPLE
ASSAY
68 results
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Clear Filters
ChIP-seq
cell line
HepG2
45
GM12878
12
tissue
liver
4
spleen
3
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
epithelial cell of proximal tubule
1
retinal pigment epithelial cell
1
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