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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
79
DNase-seq
28
ChIP-seq
7
ATAC-seq
Assay category
86
DNA accessibility
28
DNA binding
Target of assay
18
histone
18
histone modification
10
narrow histone mark
8
broad histone mark
7
control
3
RNA binding protein
3
transcription factor
Date released
707
February, 2021
411
August, 2017
399
May, 2021
341
May, 2020
315
November, 2017
204
February, 2023
200
May, 2022
198
October, 2019
189
August, 2021
168
July, 2018
107
June, 2019
94
December, 2017
87
May, 2019
86
November, 2018
79
July, 2019
76
October, 2018
73
September, 2018
November, 2019
60
March, 2020
59
September, 2020
57
April, 2019
49
April, 2018
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
19
April, 2020
16
January, 2021
16
November, 2020
13
February, 2020
11
September, 2017
8
January, 2018
7
August, 2020
7
December, 2019
7
October, 2017
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
1
May, 2023
Available data
113
bam
107
bigWig
106
bed narrowPeak
100
bigBed narrowPeak
80
bed broadPeak
79
bed bed3+
79
bigBed broadPeak
7
fastq
Organism
114
Homo sapiens
Biosample type
77
tissue
37
primary cell
Organ
kidney
brain
43
musculature of body
35
heart
32
limb
20
epithelium
19
connective tissue
18
ureter
9
pancreas
7
eye
7
vasculature
5
blood vessel
2
adipose tissue
2
artery
2
liver
1
spleen
Project
114
AMP
Genome assembly (visualization)
107
GRCh38
101
hg19
Lab
113
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
22
inconsistent ontology term
month_released!
November, 2019
organ_slims!
brain
kidney
BIOSAMPLE
ASSAY
114 results
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Clear Filters
DNase-seq
ChIP-seq
ATAC-seq
tissue
heart
18
muscle of arm
17
muscle of leg
13
body of pancreas
2
4
heart left ventricle
3
+ See 14 more…
primary cell
cardiac fibroblast
3
5
skeletal muscle satellite cell
8
mesenchymal stem cell
7
cardiac muscle cell
1
3
retinal pigment epithelial cell
1
3
+ See 4 more…
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