Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
158
DNase-seq
70
ChIP-seq
2
total RNA-seq
Assay category
158
DNA accessibility
70
DNA binding
2
Transcription
Target of assay
41
histone
41
histone modification
23
broad histone mark
18
narrow histone mark
16
control
13
transcription factor
9
RNA binding protein
Date released
403
November, 2017
397
May, 2021
341
May, 2020
308
August, 2021
286
August, 2017
263
October, 2019
200
May, 2022
194
February, 2021
177
June, 2019
166
July, 2018
156
February, 2023
94
December, 2017
87
November, 2018
80
April, 2019
79
July, 2019
73
September, 2018
70
May, 2019
60
November, 2019
59
September, 2020
58
March, 2020
53
October, 2018
47
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
22
October, 2017
20
February, 2020
19
April, 2020
16
January, 2021
14
May, 2023
11
September, 2017
10
December, 2019
10
November, 2020
7
August, 2020
7
January, 2018
5
March, 2019
5
March, 2023
4
October, 2022
3
August, 2018
3
June, 2018
1
August, 2022
Available data
230
bam
214
bigWig
212
bed narrowPeak
212
bigBed narrowPeak
158
bed bed3+
158
bed broadPeak
158
bigBed broadPeak
37
fastq
2
tsv
Organism
230
Homo sapiens
Biosample type
192
tissue
38
primary cell
Organ
81
kidney
57
pancreas
43
musculature of body
connective tissue
35
heart
32
limb
30
brain
24
adipose tissue
22
epithelium
ureter
7
eye
7
vasculature
blood vessel
2
artery
2
liver
Project
230
AMP
Genome assembly (visualization)
214
GRCh38
193
hg19
Lab
230
AMP-T2D consortium
Audit category:
14
inconsistent ontology term
Audit category:
1
inconsistent control read length
organ_slims!
blood vessel
connective tissue
ureter
BIOSAMPLE
ASSAY
230 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
ChIP-seq
total RNA-seq
tissue
body of pancreas
2
33
heart
18
muscle of arm
17
endocrine pancreas
16
kidney
13
+ See 29 more…
primary cell
skeletal muscle satellite cell
8
cardiac muscle cell
1
3
epithelial cell of proximal tubule
1
3
retinal pigment epithelial cell
1
3
skeletal muscle cell
1
2
+ See 12 more…
See all biosamples
Download