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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
total RNA-seq
5
ChIP-seq
4
DNase-seq
4
pCHi-C
2
ATAC-seq
Assay category
14
Transcription
6
DNA accessibility
5
DNA binding
Target of assay
3
histone
3
histone modification
3
narrow histone mark
1
RNA binding protein
1
control
1
transcription factor
Date released
31
February, 2023
22
October, 2019
7
June, 2019
1
February, 2020
1
July, 2019
Available data
7
bam
6
bed narrowPeak
6
bigBed narrowPeak
6
bigWig
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
29
Homo sapiens
Biosample type
25
tissue
4
primary cell
Organ
116
brain
111
kidney
101
limb
55
epithelium
54
vasculature
52
blood vessel
43
heart
43
musculature of body
42
nerve
28
artery
28
eye
22
connective tissue
22
pancreas
21
vein
18
ureter
9
liver
gonad
4
ovary
2
adipose tissue
2
pituitary gland
1
lymph node
1
skin of body
Project
29
AMP
Genome assembly (visualization)
6
GRCh38
6
hg19
Lab
29
AMP-T2D consortium
organ_slims!
gonad
BIOSAMPLE
ASSAY
29 results
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total RNA-seq
ChIP-seq
DNase-seq
pCHi-C
ATAC-seq
tissue
islet of Langerhans
14
2
4
2
retina
3
primary cell
retinal pigment epithelial cell
3
1
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