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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
187
DNase-seq
59
ChIP-seq
26
total RNA-seq
14
ATAC-seq
1
single cell RNA-seq
Assay category
201
DNA accessibility
59
DNA binding
27
Transcription
Target of assay
51
histone
51
histone modification
26
narrow histone mark
25
broad histone mark
8
control
RNA binding protein
4
transcription factor
Date released
715
February, 2021
403
August, 2017
394
May, 2021
369
November, 2017
341
May, 2020
318
August, 2021
314
October, 2019
214
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
115
May, 2019
108
July, 2019
90
December, 2017
76
April, 2019
73
September, 2018
67
November, 2018
65
October, 2018
64
March, 2020
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
May, 2024
33
December, 2018
25
February, 2020
24
January, 2019
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
286
bam
278
bigWig
252
bed narrowPeak
220
bigBed narrowPeak
187
bed bed3+
187
bed broadPeak
187
bigBed broadPeak
73
fastq
26
tsv
1
csv
Organism
287
Homo sapiens
Biosample type
163
tissue
124
primary cell
Organ
80
kidney
79
epithelium
76
pancreas
43
musculature of body
34
heart
32
limb
30
brain
18
ureter
17
connective tissue
7
vasculature
6
eye
5
blood vessel
2
artery
2
liver
1
adipose tissue
Project
287
AMP
Genome assembly (visualization)
278
GRCh38
255
hg19
Lab
287
AMP-T2D consortium
Audit category:
24
inconsistent ontology term
Audit category:
32
missing controlled_by
month_released!
November, 2019
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
287 results
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Clear Filters
DNase-seq
ChIP-seq
total RNA-seq
ATAC-seq
single cell RNA-seq
tissue
heart
18
muscle of arm
17
kidney
13
muscle of leg
13
brain
12
+ See 34 more…
primary cell
pancreatic ductal cell
13
4
4
pancreatic beta cell
10
4
pancreatic acinar cell
8
2
3
pancreatic alpha cell
10
3
pancreatic endocrine cell
11
+ See 23 more…
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