Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 173DNase-seq
  • 25ChIP-seq
Assay category
  • 173DNA accessibility
  • 25DNA binding
Target of assay
  • 17histone
  • 17histone modification
  • 9narrow histone mark
  • 8broad histone mark
  • 6control
  • 2RNA binding protein
  • 2transcription factor
Date released
  • 683February, 2021
  • 400November, 2017
  • 382August, 2017
  • 373May, 2021
  • 341May, 2020
  • 313August, 2021
  • 279October, 2019
  • 198June, 2019
  • 153February, 2023
  • 135July, 2018
  • 120May, 2022
  • 115May, 2019
  • 95July, 2019
  • 88November, 2018
  • 80April, 2019
  • 75December, 2017
  • 74October, 2018
  • 58March, 2020
  • 47September, 2023
  • 45November, 2019
  • 40May, 2024
  • 40September, 2020
  • 39February, 2018
  • 35December, 2018
  • 30January, 2019
  • 25February, 2020
  • 23October, 2017
  • 19April, 2020
  • 16April, 2018
  • 16January, 2021
  • 15May, 2023
  • 12September, 2018
  • 10November, 2020
  • 8January, 2018
  • 6September, 2017
  • 5March, 2019
  • 5March, 2023
  • 4December, 2019
  • 2June, 2018
  • 1August, 2018
  • 1August, 2022
  • 1July, 2025
  • 1October, 2022
Available data
  • 198bam
  • 192bed narrowPeak
  • 192bigBed narrowPeak
  • 192bigWig
  • 173bed bed3+
  • 173bed broadPeak
  • 173bigBed broadPeak
Organism
  • 198Homo sapiens
Biosample type
  • 163tissue
  • 35primary cell
Organ
  • 81kidney
  • 43musculature of body
  • 35heart
  • 32limb
  • 30brain
  • epithelium
  • 18connective tissue
  • 18ureter
  • 7eye
  • 7vasculature
  • 5blood vessel
  • 4pancreas
  • 2artery
  • 2liver
  • 1adipose tissue
Project
  • 198AMP
Genome assembly (visualization)
  • 192GRCh38
  • 175hg19
Lab
  • 198AMP-T2D consortium
Audit category:
  • 22inconsistent ontology term
organ_slims!
  • epithelium
BIOSAMPLE
ASSAY

198 results

search-icontable-tab-icon
Clear Filters
DNase-seq
ChIP-seq
tissue
heart18
muscle of arm17
kidney13
muscle of leg13
brain12
primary cell
cardiac fibroblast35
skeletal muscle satellite cell8
mesenchymal stem cell7
cardiac muscle cell13
skeletal muscle cell12
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego