Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 109DNase-seq
  • 28ChIP-seq
Assay category
  • 109DNA accessibility
  • 28DNA binding
Target of assay
  • 18histone
  • 18histone modification
  • 10narrow histone mark
  • 8broad histone mark
  • 7control
  • 3RNA binding protein
  • 3transcription factor
Date released
  • 707February, 2021
  • 411August, 2017
  • 406November, 2017
  • 399May, 2021
  • 341May, 2020
  • 284October, 2019
  • 205February, 2023
  • 200May, 2022
  • 189August, 2021
  • 168July, 2018
  • 137June, 2019
  • 115May, 2019
  • 97July, 2019
  • 94December, 2017
  • 88November, 2018
  • 76October, 2018
  • 73September, 2018
  • 62March, 2020
  • 61November, 2019
  • 59September, 2020
  • 57April, 2019
  • 49April, 2018
  • 40May, 2024
  • 39February, 2018
  • 35December, 2018
  • 30January, 2019
  • 25February, 2020
  • 23October, 2017
  • 19April, 2020
  • 16January, 2021
  • 16November, 2020
  • 11September, 2017
  • 8January, 2018
  • 7August, 2020
  • 7December, 2019
  • 5March, 2019
  • 5March, 2023
  • 4August, 2018
  • 4October, 2022
  • 3June, 2018
  • 1August, 2022
  • 1July, 2025
  • 1May, 2023
Available data
  • 137bam
  • 130bed narrowPeak
  • 130bigBed narrowPeak
  • 130bigWig
  • 109bed bed3+
  • 109bed broadPeak
  • 109bigBed broadPeak
Organism
  • 137Homo sapiens
Biosample type
  • 95tissue
  • 42primary cell
Organ
  • kidney
  • 43musculature of body
  • 35heart
  • 32limb
  • 30brain
  • 20epithelium
  • 18connective tissue
  • 18ureter
  • 7eye
  • 7vasculature
  • 5blood vessel
  • 4pancreas
  • 2artery
  • 2liver
  • 1adipose tissue
Project
  • 137AMP
Genome assembly (visualization)
  • 130GRCh38
  • 114hg19
Lab
  • 137AMP-T2D consortium
Audit category:
  • 22inconsistent ontology term
organ_slims!
  • kidney
BIOSAMPLE
ASSAY

137 results

search-icontable-tab-icon
Clear Filters
DNase-seq
ChIP-seq
tissue
heart18
muscle of arm17
muscle of leg13
brain12
heart left ventricle3
primary cell
cardiac fibroblast35
skeletal muscle satellite cell8
mesenchymal stem cell7
cardiac muscle cell13
retinal pigment epithelial cell13
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego