Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
709
target gene predictions
708
candidate regulatory elements
708
chromatin state
261
accessible chromatin
6
histone modifications
Date released
2380
February, 2021
2137
September, 2022
364
May, 2021
354
February, 2024
269
September, 2023
261
November, 2021
255
June, 2020
145
May, 2020
117
August, 2021
117
March, 2020
96
January, 2022
88
October, 2022
79
January, 2020
63
March, 2023
55
February, 2020
54
January, 2021
46
May, 2022
37
November, 2022
31
February, 2023
27
March, 2024
24
August, 2017
16
April, 2020
14
November, 2019
12
October, 2019
9
May, 2019
8
April, 2019
8
August, 2018
1
August, 2020
1
August, 2022
1
January, 2018
1
July, 2020
1
September, 2018
Available data
1683
bed bed3+
708
bed bed9
4
bigWig
3
bam
3
bed gappedPeak
3
xls
1
bigBed narrowPeak
Organism
2392
Homo sapiens
Biosample type
1186
tissue
660
cell line
438
primary cell
108
in vitro differentiated cells
Organ
240
kidney
216
lung
210
musculature of body
201
brain
176
epithelium
intestine
144
limb
connective tissue
113
heart
110
skin of body
extraembryonic component
105
large intestine
91
embryo
87
bodily fluid
81
blood
81
vasculature
72
stomach
64
blood vessel
58
small intestine
51
liver
50
placenta
48
pancreas
47
bone element
46
mammary gland
44
prostate gland
43
adrenal gland
40
ureter
34
thymus
33
eye
33
penis
32
lymph node
28
gonad
26
spinal cord
25
adipose tissue
24
artery
23
esophagus
19
spleen
17
lymphoid tissue
14
testis
14
uterus
13
mouth
13
ovary
13
thyroid gland
10
nerve
9
skeleton
7
breast
7
bronchus
7
lymphatic vessel
7
tongue
7
urinary bladder
7
vein
6
vagina
4
nose
3
bone marrow
1
trachea
Project
2392
AMP
Genome assembly (visualization)
2391
hg19
714
GRCh38
organ_slims!
connective tissue
extraembryonic component
intestine
BIOSAMPLE
TYPE
2392 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
chromatin state
accessible chromatin
histone modifications
tissue
stomach
19
19
19
3
heart
19
19
19
2
brain
16
16
16
1
lung
16
16
16
muscle of arm
16
16
16
+ See 91 more…
cell line
A549
18
18
18
1
K562
6
6
6
1
MCF-7
5
5
5
1
HeLa-S3
3
3
3
endometrium adenocarcinoma
3
3
3
+ See 208 more…
primary cell
common myeloid progenitor, CD34-positive
13
13
13
CD4-positive, alpha-beta memory T cell
9
9
9
B cell
8
8
8
CD8-positive, alpha-beta memory T cell
7
7
7
mononuclear cell
6
6
6
+ See 76 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
10
10
10
1
neural progenitor cell
4
4
4
endodermal cell
2
2
2
muscle cell
2
2
2
bipolar neuron
1
1
1
1
+ See 24 more…
See all biosamples
Download