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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
total RNA-seq
2
ATAC-seq
2
Hi-C
1
ChIP-seq
1
pCHi-C
Assay category
3
Transcription
2
3D chromatin structure
2
DNA accessibility
1
DNA binding
Target of assay
1
histone
1
histone modification
1
narrow histone mark
Date released
321
November, 2017
194
May, 2020
120
May, 2022
83
August, 2017
67
December, 2017
61
September, 2018
53
November, 2018
52
February, 2023
41
October, 2019
37
August, 2021
35
February, 2021
33
April, 2018
33
July, 2018
26
May, 2021
July, 2019
21
June, 2019
19
September, 2020
16
November, 2019
9
March, 2020
7
August, 2020
6
December, 2019
6
November, 2020
5
January, 2019
5
May, 2019
5
September, 2017
3
August, 2018
3
October, 2022
2
October, 2018
1
December, 2018
1
February, 2020
1
June, 2018
Available data
6
bigWig
5
tsv
4
bam
2
bedpe bed3+
2
hic
1
bed narrowPeak
Organism
9
Homo sapiens
Biosample type
5
cell line
3
tissue
1
primary cell
Organ
14
pancreas
7
heart
6
epithelium
5
musculature of body
4
blood vessel
4
vasculature
3
liver
2
brain
2
connective tissue
2
intestine
2
kidney
1
adipose tissue
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
small intestine
1
spleen
1
stomach
1
thymus
1
urinary bladder
1
vein
Project
6
AMP
3
T1D
Genome assembly (visualization)
8
hg19
4
GRCh38
Lab
9
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
month_released!
January, 2018
July, 2019
BIOSAMPLE
ASSAY
9 results
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Clear Filters
total RNA-seq
ATAC-seq
Hi-C
ChIP-seq
pCHi-C
cell line
EndoC_BH1
2
2
1
tissue
liver
1
1
1
primary cell
endothelial cell of umbilical vein
1
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