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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
total RNA-seq
5
pCHi-C
4
ATAC-seq
4
Hi-C
3
ChIP-seq
Assay category
8
Transcription
4
3D chromatin structure
4
DNA accessibility
3
DNA binding
Target of assay
3
histone
3
histone modification
3
narrow histone mark
Date released
315
November, 2017
242
August, 2017
194
May, 2020
157
July, 2018
144
May, 2022
131
August, 2021
101
February, 2021
92
February, 2023
72
September, 2018
64
May, 2021
63
December, 2017
60
November, 2018
57
April, 2019
55
November, 2019
53
October, 2018
41
July, 2019
41
June, 2019
40
May, 2024
39
April, 2018
33
October, 2019
24
March, 2020
23
May, 2019
19
September, 2020
11
September, 2017
10
November, 2020
8
January, 2021
7
August, 2020
5
December, 2019
5
February, 2020
5
January, 2019
5
March, 2019
5
October, 2017
3
August, 2018
3
October, 2022
1
August, 2022
1
December, 2018
1
June, 2018
Available data
13
bigWig
13
tsv
9
bam
4
bedpe bed3+
4
hic
3
bed narrowPeak
Organism
24
Homo sapiens
Biosample type
19
tissue
5
cell line
Organ
14
pancreas
7
heart
6
epithelium
5
musculature of body
4
blood vessel
4
vasculature
3
liver
2
brain
2
connective tissue
2
intestine
2
kidney
1
adipose tissue
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
small intestine
1
spleen
1
stomach
1
thymus
1
urinary bladder
1
vein
Project
17
AMP
7
T1D
Genome assembly (visualization)
17
hg19
9
GRCh38
Lab
24
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
month_released!
January, 2018
BIOSAMPLE
ASSAY
24 results
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total RNA-seq
pCHi-C
ATAC-seq
Hi-C
ChIP-seq
tissue
islet of Langerhans
2
2
2
heart left ventricle
1
1
1
heart right ventricle
1
1
1
liver
1
1
1
pancreas
1
1
1
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cell line
EndoC_BH1
2
2
1
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